Variovorax paradoxus S110: Vapar_5010
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Entry
Vapar_5010 CDS
T00916
Name
(GenBank) conserved hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_5010
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5010
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_5010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ACS21613
UniProt:
C5CQ41
LinkDB
All DBs
Position
1:5323323..5324654
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AA seq
443 aa
AA seq
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MKLKSLALTAALVASTLGALLAPSLAQAQAKEQFFPLLVYRTGPYAPNGTPWANGKQDYI
KYINATGGINGVKITYEECETGYATDKGVECYERLKGRPGVTLFDPQATGITFALTDKVP
TDKIPLITLGYGLSASQDGSVFKWNFPLMGSYWTAADILIQHIGKKEGGMDKLKGKKIAL
VYHDSPFGKEPIPLLQERAKQNGFELSLIPVTAPGVEQKSAWLQVRQSRPDYVLLWGWGV
MNSTALKEAVATGYPREKMYGVWWAGAEPDVKDVGANAKGYNALALNTSGTEPKVIQEIL
KQVHDKGQGTGPKDEVGSVLYTRGVIIQMLGVEAVKRAQERFGKGKVMTGEQVRWGMENL
ALDQKKLDSLGFSGVLRPLGTSCQDHMGSTWARVHTWDGAKWGGMSDWYQADEQIIKPMV
KVAAEKYAGEKKLTRRDAADCSM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaatcgctcgctctgaccgccgccctggtggccagcaccctcggcgcgctg
cttgcgccatcgctcgcccaggcgcaggccaaggaacagttctttccgctgctggtgtac
cgcaccggcccctatgcgcccaacggcacgccctgggccaatggcaagcaggactacatc
aagtacatcaacgccaccggcggcatcaacggcgtgaagatcacgtacgaagagtgcgag
accggctacgccaccgacaagggcgtggagtgctacgaacgcctgaagggccgccccggc
gtgacgctgttcgacccgcaggccaccggcatcacctttgcgctgaccgacaaggtgccc
accgacaagatcccgctcatcacgctgggctacgggctgtcggcgtcgcaggacggcagc
gtgttcaagtggaacttcccgctgatgggcagctactggaccgcggccgacatcctgatc
cagcacatcggcaagaaggaaggcggcatggacaagctcaagggcaagaagatcgccctc
gtgtaccacgactcgccgttcggcaaggagccgatcccgctgctgcaggagcgcgccaag
cagaacggcttcgagctgtcgctgattccggtcaccgcacccggcgtggagcagaagtcc
gcctggctgcaggtgcgccagtcgcggcccgactacgtgctcttgtggggctggggcgtg
atgaactccaccgcgctgaaggaggccgtggccaccggctacccacgcgagaagatgtat
ggcgtgtggtgggccggcgccgagcctgacgtgaaggacgtgggcgccaacgccaagggc
tacaacgcgctggcgctcaacacctcgggcaccgagccgaaggtgatccaggaaatcctc
aagcaggtccacgacaagggccagggcacggggccgaaggacgaagtgggctcggtgctc
tacacccgcggcgtgatcatccagatgctgggcgtcgaagccgtgaagcgcgcgcaggag
cgcttcggcaagggcaaggtcatgaccggcgagcaggtgcgctggggcatggagaacctc
gcgctcgaccagaagaagctcgattcgctgggcttctcgggcgtactgcgcccgctcggc
acctcgtgccaggaccacatgggctcgacctgggcccgcgtgcacacctgggacggcgcc
aagtggggcggcatgtccgactggtaccaggccgacgagcagatcatcaagccgatggtg
aaggtggcggccgagaagtacgcgggcgaaaagaagctcacgcgccgcgacgcagccgat
tgcagcatgtga
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