Variovorax paradoxus S110: Vapar_5069
Help
Entry
Vapar_5069 CDS
T00916
Name
(GenBank) S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
KO
K07568
S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:
2.4.99.17
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vap03016
]
Vapar_5069
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.17 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Vapar_5069
Transfer RNA biogenesis [BR:
vap03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Vapar_5069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Queuosine_synth
DUF5558
Motif
Other DBs
NCBI-ProteinID:
ACS21671
UniProt:
C5CQ99
LinkDB
All DBs
Position
1:5383023..5384069
Genome browser
AA seq
348 aa
AA seq
DB search
MRAFTLSDFDFDLPPELVAQHPASERTASRLLDGTGSTPADRIFKSLPSLLRAGDLLVFN
DTRVVKARLFGEKPTGGKLELLVERVLQGHEVVAHMKVSKKPPVGTTLQMVGGFRATLLG
RWPEEDGALFRFGFESGAGEDPYALMARCGHVPLPPYIMHSDSADDERRYQTVFARVPGA
VAAPTAALHFDEALLAELETRGVQRASVTLHVGAGTFQPVKTENIAEHTMHAERYEVPEA
TQRAIADCKARGGRVVAVGTTTVRTLESWAKSGEAAGDTRIFITPGFVFEHVDLLVTNFH
LPKSTLMMLVSAFAGYEHVMALYAHAIAQHYRFFSYGDAMLLARAAPA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttcacgctttccgatttcgatttcgacctaccgcccgagctggtggcacaa
cacccggcctccgaacgcaccgcctcccgtctgctcgacggcaccggcagcaccccggcc
gaccgcatcttcaagagcctgccctcgctgctgcgcgcgggcgacctgctggtcttcaac
gacacgcgcgtggtcaaggcgcgcctgttcggcgagaagccgaccggcggcaagctcgaa
ctgctggtcgagcgcgtgctgcagggccacgaggtcgtggcgcacatgaaggtcagcaag
aagccgcccgtgggcaccacgctgcagatggtcggcggctttcgcgccacgctgctgggc
cgttggcccgaggaagacggcgcgctgttccgcttcggcttcgagagcggcgccggcgaa
gacccctacgcgttgatggcccgctgcgggcatgtgccgctgccgccctacatcatgcac
agcgattcggccgacgacgagcgccgctaccagaccgtgttcgcgcgcgtgcccggcgcc
gtggccgcgccgacggccgcgctgcatttcgacgaagcgctgctggccgagctcgaaacg
cgcggcgtgcagcgcgccagcgtcacgctgcacgtgggcgccggcaccttccagccggtc
aagaccgagaacattgcagagcacacgatgcatgccgagcgctacgaagtgcccgaggcc
acgcagcgcgcgattgccgactgcaaggcgcgcggcggccgcgtggtcgcggtcggcacc
accaccgtgcgcacgctcgaatcgtgggccaagagcggcgaggccgcgggcgacacgcgc
atcttcatcacgccgggcttcgtgttcgagcatgtcgacctgctggtcaccaacttccac
ttgcccaagagcacgctgatgatgctggtctcggcctttgcaggctatgaacacgtgatg
gcgctctatgcccacgccatcgcgcagcactaccgcttcttcagctacggcgacgccatg
ctgctggcgcgcgctgctcccgcatga
DBGET
integrated database retrieval system
