Variovorax paradoxus S110: Vapar_5139
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Entry
Vapar_5139 CDS
T00916
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5139
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Vapar_5139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
FaeA
Motif
Other DBs
NCBI-ProteinID:
ACS21741
LinkDB
All DBs
Position
1:5453635..5454306
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AA seq
223 aa
AA seq
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MSIGEEERESDSEAPATRGRSRKYTQVLGLINQAAIEVFASEGLAGASTQAIADKAGLSK
AQLHYYIESKEALYRQILQDILNDWIVVFGFADEAFGPRKVLGDLIRRKMVFSFEHPLRS
RIFTAEMMRGAPVLNAMMDTSKQRTDQAAAVIENWMNQGLMDKADPMLVLFHIWAVTQFY
ADHATQAAYFRNVAQQGQDKDSKDRRYLIEQVTEFLLKGAGVR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcggagaagaggaaagagaaagcgacagcgaggcgcccgccacgcgcggccgc
tcgcgcaagtacacgcaggtgctcggcctcatcaaccaggccgccatcgaggtgttcgca
agcgagggcctggccggcgcctcgacccaggccattgccgacaaggccgggctctcgaag
gcgcagctgcactactacatcgagagcaaggaagcgctctaccggcagatcctgcaggac
atcctcaacgactggatcgtggtgttcggctttgccgacgaggccttcggcccgcgcaag
gtgctgggcgacctgatccgccgcaagatggtgttctcgttcgagcacccgctgcgctcg
cgcatcttcacggccgagatgatgcgcggcgcaccggtgctcaacgccatgatggacacg
agcaagcagcgcaccgaccaggccgccgccgtcatagagaactggatgaaccagggcctg
atggacaaggccgacccgatgctggtgctgttccacatctgggcggtgacgcagttctat
gccgaccacgccacgcaggcggcctacttccgcaacgtggcgcagcagggccaggacaag
gacagcaaggaccggcgctacctgatcgagcaggtgaccgaattcctgctgaaaggcgcg
ggcgtcaggtag
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