Variovorax paradoxus S110: Vapar_5169
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Entry
Vapar_5169 CDS
T00916
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5169
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_5169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACS21771
UniProt:
C5CR95
LinkDB
All DBs
Position
1:5490401..5492572
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AA seq
723 aa
AA seq
DB search
MFKQKKCAALVMALFPISFQSLAAEAEPAGAASGAKSLEAVTVTGDWLGTPSETKVLEHP
GARSIIERTQIQESGATSVREALRQVPGVQVQESNGTGGSDISLNVGVRGLTSRLSPRST
ILLDGVPLAYAPYGQPQLSLAPLSLGSLEAVDVVRGAGSVRYGPQNVGGIINFVTRSIPK
QFAGEVSVGVEGAGHGGGTKTTPSLFVGGTNENGLGLALLYSGTHGDGFRRSNDHTSIDD
LMLKGAYRLSKTDDIAVTLHHFEGKGRMPGGLTTAQFAADPFQSDRPFDEFTGRRTDGSV
KYTHDDGVNKFEMLSYYTDSYRSSYLEQEGTGANTGRRRLTSAPRNYKTYAFEPRYSRLI
DSGSVVQEISVGARYLKEEASEVATRSGYYPPRPGFDAYALAQPAYQSSKGGTTAHAVYI
DDRIDFGNWTVTPGVRYESIRSHNDVFTLANGRVTGANYPKIDSNEVLPTLSVLYRMNER
WSVFANAGVSFGPQQYAQLAQSTSGLHPEKAKTYEIGTHYKGEAWSGELTLFNINFDKEL
LLARSITGDVGQWTDLGATRHRGLESALRYQLGSLSDSLKGLSVSATYTYTQAIAKAGAF
AGRDLPFYSRQVATLGARYERGPWTFNADVYAQSKQRSPGSPDDGAQYITLEDPNGRLGN
IPGYATMNLRAAYDFGPSMSNLKLAVGIKNLFDRRYYNRSVDNNGGKYVGQPRTVYLQAS
VAF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaagcaaaagaagtgcgccgcactggtcatggcgctgttccccatcagcttccag
agcctggcggccgaagccgagccggccggtgccgcatccggcgcgaaatcgctggaggcg
gtgaccgtcaccggcgactggctcggcacgcccagcgagaccaaggtgctcgagcacccg
ggcgcgcgcagcatcatcgagcgcacgcagatccaggaaagcggcgccaccagcgtgcgc
gaggcgctgcgccaggttcccggcgtgcaggtgcaggagagcaacggcacgggcggcagc
gacatctcgctcaacgtgggcgtgcgcggcctcacctcgcggctgtcgccgcgctcgacc
atcctgctggacggcgtgccgctggcctatgcaccctacggccagccgcagctgtcgctg
gcgccgctgtcgctcggcagcctggaagcggtcgacgtggtgcgcggcgcgggctcggtg
cgctacggcccgcagaacgtgggcggcatcatcaacttcgtgacgcgctcgattcccaag
cagttcgcgggcgaagtgagcgtgggcgtggaaggcgcgggccacggcggcggcaccaag
accacgcccagcctgttcgtgggcggcaccaacgagaacggcctgggcctggcgctgctg
tattcgggcacgcacggcgacggctttcgccggagcaacgaccacaccagcatcgacgac
ctgatgctcaagggcgcctaccgcctgtcgaagaccgacgacatcgcggtgacgctgcat
cacttcgagggcaagggccgcatgccgggcgggctgaccaccgcgcagttcgcggccgac
ccgttccagtcggaccgtccgttcgacgaattcacgggacgccgtaccgacggctcggtc
aagtacacgcacgacgacggcgtgaacaagttcgagatgctgagctactacacggactcc
taccgcagcagctacctcgagcaggaaggcaccggtgccaacacgggccggcggcgcctg
acctccgcgccgcgcaactacaagacctacgccttcgagccccgctactcgcgcctgatc
gactcgggcagcgtggtgcaggagatcagcgtcggcgcgcgctacctcaaggaagaggcc
tccgaggtggcgacgcgcagcggctactacccgccgcgcccgggcttcgatgcctacgcg
ctcgcccagccggcttaccagtcgagcaagggcggcaccaccgcccatgcggtctacatc
gacgaccgcatcgacttcggcaactggacggtcacgcccggcgtgcgctacgaatcgatc
cgctcgcacaacgacgtcttcacgctggccaacggccgggtcaccggcgcgaactatccg
aagatcgactccaacgaagtgctgccgacgctgtcggtgctctaccgcatgaacgagcgc
tggtcggtgttcgcgaacgccggcgtgtcgttcgggccgcagcagtatgcgcagctcgcg
cagtccaccagcggcctgcaccccgagaaggccaagacgtacgagatcggcacgcactac
aagggcgaggcctggagcggcgagctcacgctgttcaacatcaacttcgacaaggaactg
ctgctggcccgctccatcaccggcgacgtcggccagtggaccgacctgggcgccacgcgg
caccgcggcctggagtcggcgctgcgctaccagctcggcagcctgagcgattcgctcaag
ggcctgtcggtgtcggccacctacacctacacgcaggcgattgccaaggccggggccttt
gccggccgcgacctgcccttctactcgcgccaggtggccacgctcggcgcgcgctacgag
cgcgggccctggaccttcaatgccgacgtgtacgcgcagtcgaagcagcgctcgccgggc
tcgccagacgacggcgcgcagtacatcacgctggaagacccgaacggccggctcggcaac
attccgggctacgccaccatgaacctgcgcgcggcgtacgacttcggcccctcgatgagc
aacctgaagctcgccgtcggcatcaagaacctgttcgaccgccgctactacaaccgctcg
gtcgacaacaacggcggcaagtacgtgggccagccgcgcacggtgtacctgcaggcctcg
gtggcgttctga
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