Variovorax paradoxus S110: Vapar_5232
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Entry
Vapar_5232 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5232
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Vapar_5232
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_22
RsgA_GTPase
Mg_chelatase
NACHT
AAA
Sigma54_activat
AAA_5
ATP-synt_ab
DUF3987
Motif
Other DBs
NCBI-ProteinID:
ACS21834
UniProt:
C5CRF8
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All DBs
Position
1:complement(5553792..5555450)
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AA seq
552 aa
AA seq
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MSATVTPMKPVQPVLDVVNLGIRLPKGADRALAVDGATLSVLPGQTLCVVGESGSGKSMI
ANAVMGLLPRPHVEPVAGQILFEGRDLLQLSEPQLRELRGRRIGMVFQEPMTALNPVMRI
GEQIGEVFDAHGSVPAAEKRRRILAALADVGLPDPELLIDAYPFRLSGGQRQRVMIACAL
VLEPVLLIADEPTTALDVTTQAQILALIRELQQRRGTAVLFITHDFGVVSEIADHVVVMQ
TGQVVEAGPVRQVLDAPQHPYTRKLIAAIPTGNAERDTPTGEIVRVLQVQDLCKTYSSGN
GLFKRGRSVQAAKNVSFELRRGETLGLVGESGSGKSSVGRCLVGLSPFDSGRILFKGRSL
SQGPAFRREAAGKIQMVFQDPYASLNPRHRVGAAIAGGPIAQGVSKAEAIARAMELLKLV
GLGADAAERYPHEFSGGQRQRIGIARALAMQPELLVADEPVSALDVSVQAQVLELFTQVR
EQFQLAMVFITHDLRVAGQMCDHIAVMQRGEVVEYGETHKVLGDPKHAYTRKLIEAVPRL
VSAASPAEALVA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaccgtcacgcccatgaagccggtgcagccggtgctcgacgtcgtcaacctc
ggcatccggctgcccaagggcgcggaccgcgcgctggctgtcgacggcgccacgctgtcg
gtgctgccgggccagacgctgtgcgtggtcggcgaatcgggctcgggcaagtcgatgatc
gccaatgccgtgatgggcctgctgccgcgcccgcatgtggagcccgtggccgggcagatc
ctgttcgagggccgcgacctgctgcagctcagcgagccgcagctgcgcgagctgcgcggg
cgccgcatcggcatggtgttccaggagccgatgacggcgctcaaccccgtgatgcgcatc
ggcgagcagatcggcgaggtcttcgatgcgcacggcagcgtgcccgcggccgagaagcgg
cggcgcatcctggccgcgctggccgacgtgggcctgcccgacccggaactgctgatcgac
gcctatccgttccgcctctcgggcggccagcgccagcgcgtgatgatcgcctgcgcactg
gtgctcgagcccgtgctcttgattgccgacgagccgaccaccgcgctcgacgtgacgacg
caggcacagatcctcgcgctgatccgcgagctgcagcagcgccgcggcacggcggtgctg
ttcatcacgcacgacttcggcgtggtgtcggagattgccgaccacgtggtggtgatgcag
accggccaggtcgtcgaggccgggccggtgcgccaggtgctcgatgcgccgcagcacccc
tacacgcgcaagctgatcgccgcgatccccaccggcaacgccgagcgcgacacgccgacc
ggcgagatcgtgcgcgtgctgcaggtgcaggacctgtgcaagacctacagctcgggcaac
ggcctcttcaagcgcggccgctcggtgcaggccgcgaagaacgtcagcttcgaactgcgc
cgcggcgagacgctggggctggtcggcgaatcgggttcgggcaagtcgagcgtgggccgc
tgcctggtggggctttcgccgttcgacagcggccggatcctgttcaagggccgcagcctg
tcgcaggggccggcgttccggcgcgaggccgccggcaagatccagatggtgttccaggac
ccgtacgcatcgctgaatccgcgccaccgcgtgggtgcggccattgcgggcggccccatt
gcgcagggcgtgagcaaggccgaagccatcgcgcgcgcgatggaactgctgaagctcgtg
ggcctgggcgccgacgcggccgagcgctatccgcacgagttctcgggcgggcagcgccag
cgcatcggcatcgcccgcgcgctggcgatgcagcccgaactgctggtggccgacgagccg
gtgtcggcgctcgacgtgtcggtgcaggcgcaggtgctcgagctcttcacgcaggtgcgc
gagcagttccagcttgcgatggtcttcatcacgcacgacctgcgcgtggccggccagatg
tgcgaccacatcgcggtgatgcagcgcggcgaggtcgtcgaatacggcgaaacgcacaag
gtgctcggcgatccgaagcacgcctacacgcgcaagctgatcgaggcggtgccgcggctg
gtgtccgccgcgtcgccggccgaggcgctggtcgcgtga
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