Variovorax paradoxus S110: Vapar_5235
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Entry
Vapar_5235 CDS
T00916
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5235
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Vapar_5235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACS21837
UniProt:
C5CRG1
LinkDB
All DBs
Position
1:complement(5557307..5558875)
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AA seq
522 aa
AA seq
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MKRRNLIQMGAASAAGLTLAGVPLHLLAQGKKGGVINAVVQPEPPGLMLGITQNGPTQMI
AGNIYEGLLRYDEKINPLPSLATSWTVNKEGTLYTFKLKPGVTWHDGKPFTSADVVFSAD
VFLRKTHARLRANLAAVESIKAIDPLTVEFKLKYPFGPFIGIFEVGSMPMIPKHIYEGTE
FATNPANATPIGTGPFKFKEWVKGSYIQLVANDKYHVKDVPLVESVYFHVIPDAASRAAA
FESGKVDLVPGGAVEYFDVLRLSKLPGAAVTTKGWEFFAPHSWLWLNNRKAPMDKLKFRQ
AVMYAIDREAMAKIAWQGFAKPATGPFNSNIKFHSTDVAKYPRNVATAKKLLEEAGYKGE
TLRLLPLPYGETWARSAEILRQNLAQAGIKVELVATDVAGWNQKLNEWDYDLAFTYVYQY
GDPALGVARNYTTGNIAKGSPFNNVEGYSNPKVDELFDAGAKEADPEKRKAIYLQVQKIL
LDEVPVAWLHELNFPTLYRTKLNNIISSGIGLNDSLGTATLA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgcaacctcatccagatgggcgccgcctcggccgccggattgacgctggcg
ggtgtcccgctgcacctgctggcgcagggcaagaagggcggcgtgatcaacgccgtggtg
cagccggagccgccgggcctgatgctgggcatcacgcagaacggccccacgcagatgatc
gcgggcaacatctacgaaggcctgctgcgctacgacgagaagatcaatccgctgccctcg
ctggccacctcgtggaccgtcaacaaggaaggcacgctctacaccttcaagctcaagccc
ggcgtcacgtggcacgacggcaagcccttcacctcggccgacgtggtgttctcggccgac
gtgttcctgcgcaagacgcatgcgcggctgcgcgccaacctggccgcggtggaaagcatc
aaggccatcgatccgctcacggtggagttcaagctcaagtaccccttcggccccttcatc
ggcatcttcgaggtcggcagcatgccgatgatcccgaagcacatctacgaaggcaccgag
ttcgcgaccaacccggccaatgccacgcccattggcaccgggccgttcaagttcaaggaa
tgggtcaagggctcttacatccagctcgtggccaacgacaagtaccacgtcaaggacgtg
ccgttggtcgagagcgtgtacttccatgtcattcccgacgcggcctcgcgcgcggcggcc
ttcgaatcgggcaaggtcgacctggtgccgggcggcgcggtcgaatacttcgacgtgctg
cggctgtccaagctgccgggcgcggcggtcaccaccaagggctgggagttctttgcgccg
cattcgtggctgtggctcaacaaccgcaaggcgccgatggacaagctcaagttccgccag
gccgtgatgtacgcgatcgaccgcgaagccatggccaagatcgcctggcagggcttcgcc
aagccggcgaccgggccgttcaacagcaacatcaagttccacagcaccgacgtcgccaag
tacccgcgcaacgtggccaccgccaagaaactgctcgaggaagccggctacaagggcgag
acgctgcgcctgctgccgctgccctacggcgaaacgtgggcgcgctcggccgagatcctg
cgccagaacctcgcgcaggccggcatcaaggtcgaactcgtggccaccgacgtggcgggc
tggaaccagaagctcaacgagtgggactacgacctcgccttcacctacgtctaccagtac
ggcgacccggcgctgggcgtggcgcgcaactacaccaccggcaacatcgccaagggctcg
cccttcaacaacgtcgagggctattcgaacccgaaggtggacgagctgttcgacgccggc
gccaaagaggccgaccccgagaagcgcaaggccatctacctgcaggtgcagaagatcctg
ctcgacgaagtgcccgtggcctggctgcacgagctcaactttccgacgctgtaccgcacc
aagctgaacaacatcatcagctcgggcatcggcctgaacgacagcctcggtaccgccacg
ctcgcatga
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