Variovorax paradoxus S110: Vapar_5258
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Entry
Vapar_5258 CDS
T00916
Name
(GenBank) glyceraldehyde-3-phosphate dehydrogenase, type I
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00710
Carbon fixation by Calvin cycle
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01230
Biosynthesis of amino acids
Module
vap_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
vap_M00002
Glycolysis, core module involving three-carbon compounds
vap_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
vap_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vap_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5258
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Vapar_5258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vap04131
]
Vapar_5258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_5258
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
Vapar_5258
Membrane trafficking [BR:
vap04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
Vapar_5258
Exosome [BR:
vap04147
]
Exosomal proteins
Proteins found in most exosomes
Vapar_5258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ACS21860
UniProt:
C5CS80
LinkDB
All DBs
Position
1:complement(5577643..5578644)
Genome browser
AA seq
333 aa
AA seq
DB search
MAIKLGINGFGRIGRNVLRAAVQNFKNDIEIVAINDLLEPDYLAYMLQYDSVHGRFKGEV
TVEGNTLIVNGKKIRLTQERDPAQLKWNEVGADIVLESTGLFLTKETCQKHLDAGAKKVI
MSAPSKDDTPMFVYGVNDKKYAGEAIVSNASCTTNCLAPLAKVLNDKWGIKRGLMTTVHA
ATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGVVIPELNKKLTGMSFRVPTSDV
SVVDLTVELEKEATYKEICAEMKSQSEGALKGVLGYTEDKVVATDFRGDPRTSIFDAEAG
IALDGTFVKLVSWYDNEWGYSNKCLEMVKVVAK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaactcggtatcaatggcttcggtcgcatcggtcgcaacgtgctgcgcgca
gcggtgcagaacttcaagaacgacatcgagatcgtcgccatcaacgacctgctcgagccc
gactacctggcctacatgctccagtacgactcggtgcatggccgcttcaagggcgaagtc
acggtggaaggcaacacgctgatcgtcaacggcaagaagatccgcctcacgcaggagcgc
gaccccgcgcagctgaagtggaatgaagtcggcgccgacatcgtgctcgaatccaccggc
ctcttcctcaccaaggaaacctgccagaagcacctcgacgcgggcgcgaagaaggtgatc
atgtcggcgccgtcgaaggacgacacccccatgttcgtctacggcgtgaacgacaagaag
tacgccggcgaagccatcgtcagcaacgccagctgcaccaccaactgcctggcgccgctg
gccaaggtgctgaacgacaagtggggcatcaagcgcggcctgatgaccaccgtgcacgcc
gccaccgccacgcagaagaccgtcgacggcccgagcaacaaggactggcgcggcggccgc
ggcatcctggaaaacatcattccctcgagcaccggcgccgccaaggccgtgggcgtggtg
atccccgagctcaacaagaagctcacgggcatgagcttccgcgtgccgacctccgacgtg
tcggtggtcgacctcacggtggagctcgagaaggaagccacctacaaggaaatctgcgcc
gagatgaagtcgcagagcgaaggcgcgctcaagggcgtgctgggctacaccgaggacaag
gtggtggccaccgacttccgcggcgacccgcgcacctcgatcttcgacgccgaagccggc
attgcgctggacggcaccttcgtgaagctcgtgagctggtacgacaacgaatggggctac
tcgaacaagtgcctggagatggtgaaggtcgtggcgaagtaa
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