Variovorax paradoxus S110: Vapar_5293
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Entry
Vapar_5293 CDS
T00916
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00541
Biosynthesis of various nucleotide sugars
vap01100
Metabolic pathways
vap01250
Biosynthesis of nucleotide sugars
Module
vap_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Vapar_5293
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Vapar_5293
Enzymes [BR:
vap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
Vapar_5293
Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Lipid A
Vapar_5293
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase
Hydrolase_3
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
ACS21895
UniProt:
C5CSB5
LinkDB
All DBs
Position
1:complement(5616723..5617271)
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AA seq
182 aa
AA seq
DB search
MPIDFQAETLLAAQDVRVAFFDIDGVLTDGGVYFTEHGETLKRFSILDGYGLKLLRLAGI
TPAVITGRDSKPLRVRLEALGIQHVRYGTEDKLPAAQAMLEELGFSWLQAAAIGDDWPDL
PVLARAGFAAAPANAHAEVRQAVNYVTRARGGEGAAREFCDLLLTACGQYRRLLDAARGP
RQ
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgacttccaggccgagaccttgctcgccgcgcaggacgtgcgcgtcgcgttc
ttcgacatcgacggcgtgctgaccgacggcggcgtgtatttcaccgagcatggcgaaacc
ctcaagcgcttcagcatcctggacggctacggcctcaagctgctgcgcctggcgggcatc
acgccggcggtgattaccgggcgcgactccaagccgctgcgcgtgcggctcgaagcgctg
ggcatccagcacgtgcgctacggcaccgaagacaagctgcccgcggcccaggccatgctc
gaggagctcggtttcagctggctgcaggccgcggccatcggcgacgactggcccgacctg
cccgtgctggcgcgcgccggctttgcggccgcgcccgccaatgcgcatgccgaagtgcgc
caggcggtcaactacgtcacgcgcgcacgcggcggagaaggcgcggcgcgcgagttctgc
gatctgctgctgacggcctgcggccagtaccgccgcctgctcgacgccgcccggggtccg
aggcaatga
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