Variovorax paradoxus S110: Vapar_5320
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Entry
Vapar_5320 CDS
T00916
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_5320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_5320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5320
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_5320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Nuc_deoxyri_tr3
Motif
Other DBs
NCBI-ProteinID:
ACS21922
UniProt:
C5CZB4
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All DBs
Position
2:18683..19630
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AA seq
315 aa
AA seq
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MIQRRRATAALAAALVGLPAFAQAQQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKVKV
TFEGPETEAMVDKQIDMLAAALAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDSGV
DSDIPVTTTTTDNKAAAALAADKMAEMIGKSGEVALVVHDQTSRTGVDRRDGFVNRIKSA
YPNIKIVSVQYGGGDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRSGKV
VIIGYDSGKQQKNAIMDGSMAGAITQNPVGMGYKTVEMAVKAIKGEKLPKVVDTGFFWYD
KTNIADPKIASVLYD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaagaagaagagccaccgccgcgctggccgcggcccttgtcggcctgccggcc
ttcgcccaggcgcagcaggagatctacattccgctcgtgtccaagggcttccagcaccag
ttctggcaggccgtgaagtccggcgccgagcaggccgccaaggacctgaaggtgaaggtc
accttcgaaggccccgagaccgaggcgatggtcgacaagcagatcgacatgctcgccgcc
gcgctcgccaagaagccgcaggccatcggctttgcggcgctcgacagccaggccgccatt
ccgctgctgaagaaggcgcaggccgccaagattccggtggtggcgttcgactcgggcgtg
gacagcgacattcccgtgaccaccaccaccaccgacaacaaggccgccgccgcgctggcg
gccgacaagatggccgagatgatcggcaagtcgggcgaagtggcgctggtggtgcacgac
cagaccagccgcaccggcgtggaccggcgcgacggcttcgtcaaccgcatcaagtcggcc
tacccgaacatcaagatcgtgagcgtgcagtacggcggcggcgaccagctgaagtcgacc
gagatcaccaagtcgatcctgcaggcctcgcccaacctgaagggcatcttcggcgccaac
gagggctcggccatcggcgtggtcaacggcgtgaaggagatgaagcgcagcggcaaggtc
gtgatcatcggctacgactccggcaagcagcagaagaacgcgatcatggacggcagcatg
gccggcgccatcacgcagaacccggtgggcatgggctacaagacggtggaaatggcggtg
aaggcgatcaagggcgagaagctgcccaaggtggtcgataccggcttcttctggtacgac
aagaccaacatcgctgacccgaagatcgcatcggtcctgtacgactga
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