Variovorax paradoxus S110: Vapar_5332
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Entry
Vapar_5332 CDS
T00916
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_5332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5332
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_5332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
DcuC
Motif
Other DBs
NCBI-ProteinID:
ACS21934
UniProt:
C5CZC6
LinkDB
All DBs
Position
2:30642..31922
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AA seq
426 aa
AA seq
DB search
MTIFVFIGSLLGLMALGMPIAFALIGCGLAMMYYTGFTDPQIVIQNMWDGANSFPLLAVP
FFMLAGEFMNAGGMTRRIVVMAMSWVGHLRGGLGYVAVAAAIIMASLSGSAVADTAALAA
VLVPLMRNAGYDVNRSCGLIACGGIIAPVIPPSIAMILFGVTGGVSITKLFIAGIVPGVM
MGLAIMLAWRWSIQRDKVKVEPRRSMTERGTATRDALWALVLPIVIVGGLKIGLFTPTEA
AVIAAVYSLFVGLVVYREIKPAQLFRLFYRAAETTAIIMFLVSAAGVSAWLITTANIPQQ
LADLVEPLMGNKMLLTFVLMLLVLVVGTALDFTPTVLIMTPVLMPVLKQAGIDPVYFGVL
FIMNNAIGLVTPPVGTVLNVVCGVAKIPMSGAIRGVMPFMVAQTLVMFLLVVFPQIVMWP
LKMMTR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttcgtcttcataggctcgctgctggggctcatggcgctggggatgccgatc
gcgttcgcattgatcggctgcgggttggccatgatgtactacacgggattcaccgatccg
cagatcgtgatccagaacatgtgggacggcgcgaacagcttcccattgctcgcagtgccc
ttcttcatgctggccggggagttcatgaacgcaggcggcatgacgcggcgcatcgtggtc
atggcgatgtcgtgggtcggccaccttcggggcgggctgggctatgtcgctgtggcggcg
gcgatcatcatggcgtcgctgtcgggttcggcggtggccgatacggcagccctggccgcg
gtgctggtgccactcatgcgcaacgccggctacgacgtcaaccgctcctgcggcctgatc
gcctgcggcggcatcatcgcgccggtcataccgccttcgatcgcgatgatcctttttggc
gttaccggcggcgtgtcgatcaccaagctcttcatcgccgggatcgtgcccggcgtgatg
atggggctggccatcatgctggcctggcgctggtcgatccagcgcgacaaggtgaaggtt
gagcccaggcgctcgatgaccgagcgcgggaccgccacgcgcgatgcgctctgggcgctg
gtgctgccgatcgtgatcgtcggcgggctcaagatcggcctcttcacgcccaccgaagca
gccgtgatcgctgcggtctattcgctgttcgtcggcctcgtggtctaccgcgagatcaag
ccggcccaactgtttcggctcttctatcgcgccgccgaaaccacggcgatcatcatgttc
ctggtgtcggcggccggtgtctcggcctggctcatcaccacggccaacattccgcagcag
ctcgccgatctcgtcgagcccctgatgggcaacaagatgctgctgaccttcgtgctgatg
ctgcttgttctggtggtggggacggcgctggacttcacgcccacggtgctcatcatgacg
ccggtattgatgccggtcctgaagcaggcgggcatcgacccggtgtacttcggcgtgctg
ttcatcatgaacaacgccatcggcctggtcacgccgcccgtgggtaccgtgctcaacgtc
gtctgcggggttgccaagatcccgatgagcggcgcgatccgcggggtcatgcccttcatg
gtcgcgcagaccctcgtcatgttcctgctggtcgtctttccccagatcgtgatgtggccg
ctgaagatgatgacccgctga
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