Variovorax paradoxus S110: Vapar_5377
Help
Entry
Vapar_5377 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5377
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_5377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_29
HTH_IclR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACS21979
UniProt:
C5CZK0
LinkDB
All DBs
Position
2:complement(82670..83584)
Genome browser
AA seq
304 aa
AA seq
DB search
MLLHVDEEITFRKLEILLAFMETGNLARAAEKLEISTVSVHRALHSLETGLRCALFRHEG
RNLHPTDAAQALADVARDVLRTMSEGIRATREVAGYSSDRIRIGSLYSLTSRTVPRLIMG
LKLRKPELHTELVLGSNADLLQKLRDGAIDAALMAVPEGTADVESEPLFEDDIRFAAPVG
SPYSGQKEIDLAACAGERFVSLSEGFVTYSGFVESFRVAGFTPNVVMETGDIFSLMNLVS
GGVGYTLLPGRVWGVMPQNVQLIPLQPRYLMRQTIALNFLRTRERDPNLLALLALCRTSK
AELA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccacgtcgacgaagagatcaccttccgcaagctcgagatcctgctggccttc
atggagaccggcaacctggcgcgcgcggccgaaaagctcgagatcagcaccgtgagcgtg
caccgcgcactgcactcgctggaaaccggcctgcgctgcgcgctgttccggcacgagggc
cgcaacctgcatccgaccgatgcggcacaggcgctggcagacgtggcgcgcgatgtgctg
cgcaccatgtccgagggcatccgcgcgacacgggaagtggccggctactcgtccgaccgg
atccgcatcggctcgctctattcgctgacgagccgcacggtgccgcggctgatcatgggg
ctgaagctgcgcaagcccgagctgcacaccgagctcgtgctcggctccaacgccgacctc
ctgcagaagctgcgcgacggcgccatcgatgccgccctcatggcggtgcccgagggaacg
gcggacgtcgagtcggagcctctgttcgaggacgacatccggttcgccgccccggtgggc
tccccctattcggggcagaaggagatcgacctggccgcctgcgccggcgagcgcttcgtg
agcctgagcgaaggcttcgtcacctacagcggcttcgtggagtcgtttcgcgtggccgga
ttcacgcccaacgtggtgatggagacgggcgacatcttctcgctcatgaacctggtgagc
ggcggcgtcggctacacgctgctgccgggccgcgtgtggggcgtgatgccgcagaacgtg
cagctgatcccgctgcagccccgctacctgatgcgccagaccatcgcgctcaacttcctg
cgcacgcgcgagcgcgatcccaacctgcttgcgctgctggcgctgtgccgcacctccaag
gccgaactggcctag
DBGET
integrated database retrieval system
