Variovorax paradoxus S110: Vapar_5379
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Entry
Vapar_5379 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_5379
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_5379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_5379
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_5379
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ACS21981
UniProt:
C5CZK2
LinkDB
All DBs
Position
2:complement(84737..85924)
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AA seq
395 aa
AA seq
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MPQATPRSVLCALTVLVGALALPSQAQTVKVGLAMDLSGPFAVGGAEAKAGFAVAMKQLG
GKLGGVPVEFVEADTAGNPEMARQVVERMLLRDKIDLFTGPVGSSVALAVGPPLFAARVP
YLSSNTGPSDYSGARCNPYFFGASYPNDAYYESAGKFASDKGFKKVAMIAPSYPGGKDAI
NGFKHTFKGSVSDELYTKLGQLDYSAELAQIRASKPDALYFFLPGAMGVSFIKQFVGAGL
SKDVALISTAFSADEDMIPAVGEPMLGLFNTAHWSFDLDNAANQRFVAAFRQQNNGRNPS
FYAGQAYDVLMAMDAAVRDVGGKLADKPALLKAIKAANYKSVRGDFRYGPNNFPIQNYYL
RVIAKDANGRIANKVIGTVLERYQDRTAAQCAMKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggccacgccccgatccgtcttgtgcgcgctcaccgtcctggtgggcgcgctg
gcactgccgtcacaggcgcagaccgtgaaggtcggcctggcgatggacctgtccggcccc
tttgccgtcggcggcgccgaggccaaggccggcttcgccgttgcgatgaagcagctgggc
ggcaagctcggcggcgtgccggtggaatttgtcgaggccgacacggcaggcaaccccgag
atggcgcgccaggtggtcgagcgcatgctgctgcgcgacaagatcgacctgttcaccggg
cccgtcggctcgtccgtcgcgctggccgtcggcccgccgctcttcgcggccagggtgccc
tacctgtcgagcaacaccggcccgagcgactattcgggcgcgcgctgcaacccgtacttc
ttcggtgcctcgtacccgaacgatgcgtactacgaatcggccggcaagttcgcctcggac
aagggcttcaagaaggtcgcgatgatcgcgcccagctatcccggcggcaaggacgccatc
aacggcttcaagcacaccttcaagggcagcgtgagcgacgagctgtacaccaagctcggg
cagctcgactactcggcggagctggcgcagattcgtgcgtcgaagcccgatgcgctgtac
ttcttcctgcccggcgccatgggcgtgagcttcatcaagcagttcgtcggcgcggggctg
tcgaaggacgtggcgctgatctccaccgcgttctcggccgacgaggacatgatccccgcc
gtcggcgagccgatgctgggcctgttcaataccgcgcactggtcgttcgacctcgacaac
gcggccaaccagcgcttcgtggcggcgttccgccagcagaacaacgggcgcaacccgtcc
ttctatgccggccaggcctacgacgtgctgatggcgatggatgcggccgtgcgcgacgtc
ggcggcaagctggccgacaagcccgcgctgctcaaggcgatcaaggcggccaactacaag
tcggtgcgcggcgatttccgctatggcccgaacaacttcccgatccagaactactacctg
cgcgtgatcgccaaggacgcgaacgggcgcatcgccaacaaggtgatcggcaccgtgctg
gagcgctaccaggaccggaccgccgcccagtgcgcgatgaagtcctga
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