Variovorax paradoxus S110: Vapar_5425
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Entry
Vapar_5425 CDS
T00916
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5425
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Vapar_5425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ACS22021
LinkDB
All DBs
Position
2:complement(130954..131832)
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AA seq
292 aa
AA seq
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MRNATDESSGDARIRMPAGRLNMRKSGQDERLGTHRQGAWTFEFDKMEARVAAVRIRTEA
LAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWMAPLHGGLWIPGGVPHSLRVSAEGNVCF
LFVEDAAAAMPQTCCSLSVSPLLRELILYLAALPEGAQREPQALRLHAVLLDQLARMPTE
AMHLPVSEEPRLRRLIDALMRDPADRTTAAQWASRLAMSERTLTRLVQLETGMSFGRWSQ
RLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFIAMFRKAMGQPPARYLARRR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgccaccgatgaatctagtggcgatgcgcggattcgaatgcctgcaggccga
ctgaatatgcgcaaatccggtcaagatgaacgcctgggcacgcatcgccaaggcgcctgg
accttcgaattcgacaagatggaggcgcgcgttgccgccgtgcggattcgcaccgaggcg
ctcgcggagggattgccggcgcaccagcatccgcaggggcagctggcgatggtgttgcgc
ggcaccgtgacctgtgaagtgccgggtgcgctgtggatggcaccgctgcacggtggcttg
tggatccccgggggcgtgccccacagcctgcgcgtttcggcggaggggaatgtctgcttt
ctgttcgtggaagatgccgccgcggccatgccgcagacctgctgctcgttgagcgtcagc
cccttgctgcgcgagctcattctttacctggccgccttgcccgagggtgcgcagcgcgag
ccgcaggcgctgcggctgcatgccgtgctgctggaccagctggcgcgcatgccgaccgaa
gccatgcacctgccggtgtcggaggagccgcgcctgcgccgcctgatcgatgcgctcatg
cgcgacccggcggaccgcaccaccgcagcgcagtgggcctcgcgcctggccatgagcgag
cggaccctgacccgcctcgtgcagctcgaaacgggcatgtccttcggccgctggagccag
cgcctgcggctgatcgtggcgctgcagtggctcacgtcgggcctttcggtgcagcaggtg
gcccatggcctgggctacgactcggtgagcgccttcatcgccatgttcaggaaggccatg
ggccagccgcccgcgcgttatcttgcgcggcgccgctag
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