Variovorax paradoxus S110: Vapar_5477
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Entry
Vapar_5477 CDS
T00916
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5477
00020 Citrate cycle (TCA cycle)
Vapar_5477
00620 Pyruvate metabolism
Vapar_5477
00650 Butanoate metabolism
Vapar_5477
09102 Energy metabolism
00720 Other carbon fixation pathways
Vapar_5477
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Vapar_5477
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Vapar_5477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_C
PFO_beta_C
Motif
Other DBs
NCBI-ProteinID:
ACS22072
UniProt:
C5D0H6
LinkDB
All DBs
Position
2:complement(177559..178614)
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AA seq
351 aa
AA seq
DB search
MTYLAKPRLHHPTLATNKVGYTRRDYEGKISTLCAGCGHDSISAAIIEACWELDIEPHRV
AKLSGIGCSSKTPDYFLGASHGFNTVHGRMPSVLTGANLANRDLLYLGVSGDGDSASIGL
GQFAHAMRRGVRMAYIVENNGVYGLTKGQFSATADQGSRSKKGVVNSDSPVDLVAMALQL
GASYVGRGFSGNKAQLVPLIKGAISHGGAAFIDVISPCVAFNNHPGSTKSYDYVREHNEA
VSRIDFISGREEITVDVAPGEVMDVRQHDGTLLRLRSLHPGYDPGDRHAAMAHMQRHQEM
GEVVTGLLFVDPLASDLHTALNTSDRPLNALGPAELCPGAEALARLNASLR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacctacctcgccaaaccccggctgcaccatccgacgctggccaccaacaaggtcggc
tacacgcggcgcgactacgagggcaagatctccacgctgtgcgccggctgcggacacgac
tccatctccgccgccatcatcgaggcctgctgggagctggacatcgagccgcaccgcgtg
gccaagctctcgggcatcggctgcagctccaagacgccggactacttcctgggcgcctcg
cacggcttcaacacggtgcacggccgcatgcccagcgtgctgaccggcgccaacctggcc
aaccgcgacctgctgtacctgggcgtctcgggcgacggcgattcggcgtccatcggcctg
ggccagttcgcccacgcgatgcggcgcggcgtgcgcatggcctacatcgtggagaacaac
ggcgtctacggcctgaccaagggccagttctcggccacggccgaccagggctccaggagc
aagaagggcgtggtcaacagcgacagcccggtggacctggtggccatggcgctgcagctg
ggcgcgagctacgtggggcggggcttctcgggcaacaaggcgcagctggtgccgctcatc
aaaggggcgatcagccacggcggcgccgccttcatcgacgtgatcagcccctgcgtcgcc
ttcaacaaccacccgggcagcaccaagagctacgactacgtgcgcgagcacaacgaggcg
gtcagccgcatcgacttcatcagcgggcgggaagagatcaccgtcgacgtggcgccgggc
gaagtgatggacgtgcgccagcacgacggcaccctgctgcgcctgcgcagcctgcatccg
ggctacgaccccggcgaccgccatgccgccatggcccacatgcagcggcaccaggagatg
ggcgaggtggtgaccgggctgctcttcgtcgatccgctggccagcgacctgcacacggcg
ctcaacaccagcgaccggccgctcaatgcgctgggcccggccgagctgtgccccggcgcc
gaggcgctcgcgcggctcaacgcgtccttgcgctga
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