Variovorax paradoxus S110: Vapar_5478
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Entry
Vapar_5478 CDS
T00916
Name
(GenBank) pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5478
00020 Citrate cycle (TCA cycle)
Vapar_5478
00620 Pyruvate metabolism
Vapar_5478
00650 Butanoate metabolism
Vapar_5478
09102 Energy metabolism
00720 Other carbon fixation pathways
Vapar_5478
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Vapar_5478
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Vapar_5478
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
WH_Egal
Motif
Other DBs
NCBI-ProteinID:
ACS22073
UniProt:
C5D0H7
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All DBs
Position
2:complement(178611..180452)
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AA seq
613 aa
AA seq
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MSAIPQIEAVNDFVIKFANVNGSGSASANELFAKAILRMGVPVSPRNIFPSNIQGLPTWY
EVRVTEDGHLGRRGGTDMMVAMNPQTWDADVAELEPGGYLFYDSTRPLPPSKFRSDVRVI
GMPLTEICNAVYQDPRQRQLFKNIVYVGALAILLGIEPEVVEKLFGEQYKGKEKLLASNV
QALHLGCDFARENLELLGLRVRRADRVGERIFVDGNSAAALGCVYGGATVAAWYPITPSS
SVAEAFQKYCAKFRVDPATGQHRFAIVQAEDELASIGMVVGAGWNGARAFTATSGPGISL
MAEFIGLAYFAEIPVTLINVQRGGPSTGMPTRTQQADILACAYASHGDTKHVLLFPEDPH
ECFEHAAAALDLADRLQTPVFLMTDLDIGMNQRLCAPFAWDDSQAYDRGKLMSAEELEAG
RDFGRYKDVDGDGIPWRTLPGTHPSKGSYFTRGTTRDAYARYSERGPDYIYNMERLLKKF
ATAATLVPQPVLRPAAQKTELGVIYFGSTSPSMHEALQALEERGIHLDALRLRAFPFPQS
VVQFLAQHRQVFVVEQNRDAQMRSLLVNELDVDPARLVRVLHFDGTPITARFIVQAISTH
VQKTQASGTKESA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattccacaaattgaggcggtcaacgatttcgtcatcaagttcgccaacgtc
aacggctcgggatcggcctcggccaacgagctgttcgccaaggccatcctgcgcatgggc
gtgccggtgagcccgcgcaacatcttcccgagcaacatccagggcctgccgacctggtac
gaggtgcgcgtgaccgaagacggccacctgggccggcgcggcggcaccgacatgatggtg
gcgatgaacccgcagacctgggacgccgacgtggccgaactcgagcccggcggctacctg
ttctacgacagcacgcggccgctgccgccctcgaagttccgcagcgacgtccgcgtgatc
ggcatgccgctgaccgagatctgcaacgccgtctaccaggacccgcggcagcgccagctg
ttcaagaacatcgtctacgtgggcgcgctggccatcctgctgggcatcgagcccgaggtg
gtcgagaagctgttcggcgagcagtacaagggcaaggaaaagctgctcgcctccaacgtg
caggcgctgcacctgggctgcgacttcgcgcgcgagaacctcgagctgctgggcctcagg
gtgcggcgcgccgaccgggtgggcgagcgcatcttcgtggacggcaacagcgccgcggcg
ctgggctgcgtgtatggcggcgccacggtggcggcctggtatccgatcacgccgtcgtcc
tcggtggccgaggccttccagaaatattgcgccaaattccgcgtggacccggccaccggg
cagcaccgctttgccatcgtgcaggcggaggacgagctggcttccatcggcatggtggtc
ggcgcgggctggaacggcgcacgcgccttcacggcgacctcgggccccggcatctcgctg
atggccgagttcatcggcctggcctactttgccgagatcccggtcacgctcatcaacgtg
cagcgcggcggcccatcgacgggcatgccgacgcgcacgcagcaggccgacatcctggcc
tgcgcctacgcctcgcacggcgacaccaagcacgtgctgctgtttccggaagacccgcac
gaatgcttcgagcatgcggcggcggcgctggacctggccgaccggctgcagacgccggtg
ttcctgatgacggacctggacatcggcatgaaccagcgcctgtgcgcgccctttgcctgg
gacgacagccaggcctacgaccgcggcaagctcatgagcgccgaggaactcgaggccggc
cgcgacttcggccgctacaaggacgtggacggcgacggcatcccctggcgtacgctgccg
ggcacgcacccgagcaagggcagctacttcacccgcggcaccacgcgcgatgcctatgcc
cgatattcggagcgcgggccggactacatctacaacatggagcggctgctgaagaagttt
gcgaccgcggccacgctggtgccgcagccggtgctgcgcccggctgcccagaagaccgag
ctgggcgtgatctatttcggttcgaccagcccgtcgatgcacgaggcgctgcaggcactg
gaagaacgcggcatccacctggacgcgctgcggctgcgcgcctttccgtttccgcagagc
gtggtgcagtttctcgcgcagcaccggcaggtgttcgtggtcgagcagaaccgcgacgcg
cagatgcgcagcctgctggtcaacgagctggacgtcgatcccgcccggctggtgcgggtg
ctgcatttcgacggcacgcccatcacggcgcgcttcatcgtccaggccatcagcacgcat
gtgcagaagacgcaagcctccggcacgaaggaatctgcatga
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