Variovorax paradoxus S110: Vapar_5556
Help
Entry
Vapar_5556 CDS
T00916
Name
(GenBank) two component transcriptional regulator, LuxR family
Organism
vap
Variovorax paradoxus S110
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
HTH_21
HTH_40
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ACS22148
UniProt:
C5D120
LinkDB
All DBs
Position
2:258415..259182
Genome browser
AA seq
255 aa
AA seq
DB search
MSTIAEPSSSSSQAAPKIRVLIADDQALIRRGMAMLLDAAPDIEVLGQAADGVEAVELAR
RLLPDVVLMDLHMPRKGGVLATREISAALPHTRVMVLTTFDRDDLVFDAVRAGAQAYLLK
DASEEEVLDTVRAVHRGESRLTPQIARKVMDQFRLLADRVAQEPPSPPAPDPRAAAQAAA
PGEPSPSDSMMTMATKPLTEREAAVLELIAKGYGNRQIATALNLAEGTAKNHVSRIMQKL
HANTRTELAVLVLKK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcgccgaaccgtcatcctcttcttcgcaggccgcgccgaaaatccgcgtg
ctgattgccgacgatcaggcactgatccgtcgcggcatggccatgctgctggacgccgcg
ccggacatcgaggtcctcggccaggcggccgacggcgtggaagccgtggagctggcccgc
cgcctgctgcccgacgtggtgctgatggatctgcacatgccgcgcaagggcggcgtgctc
gcgacgcgcgagatctcggccgccttgccgcacacgcgcgtgatggtgctgaccaccttc
gaccgcgacgacctggtcttcgacgcggtgcgtgccggcgcacaggcctacctgctcaag
gacgcttcggaagaagaggtgctggacaccgtgcgggccgtgcatcgcggcgagtcgcgc
ctcacgccgcagatcgcgcgcaaggtgatggaccagttccggctgttggccgatcgcgtc
gcgcaagagccgccctccccgccggcgccggatccccgcgccgcggcgcaggccgccgcg
cccggcgagccatcgccgtccgattcgatgatgacgatggcgaccaaaccgctgaccgag
cgcgaggccgccgtgctcgaactgatcgccaagggctatggcaaccgccagatcgccacg
gcgctcaacctggccgagggaacggcaaagaaccacgtgagccggatcatgcagaagctt
cacgcgaacacgcgcaccgaactggcggtgctggtgttgaagaagtaa
DBGET
integrated database retrieval system
