Variovorax paradoxus S110: Vapar_5558
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Entry
Vapar_5558 CDS
T00916
Name
(GenBank) histidine kinase
Organism
vap
Variovorax paradoxus S110
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HisKA_3
dCache_1
HATPase_c
sCache_3_2
HAMP
DUF5632
PIN_10
Mis12
Glyco_tranf_2_4
Cache_WalK
ZapB
Motif
Other DBs
NCBI-ProteinID:
ACS22150
UniProt:
C5D122
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Position
2:260736..262598
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AA seq
620 aa
AA seq
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MPKVTATGCENPQPMNLARRIDPRRSMAAAIGWLLIALTLCLALAANLWLRSFVRATLLE
QHGQRLEAAAEHVSAELDTALLLRLQAVSVVAAMLSEDVQRSEGARLKRSLEAVRRGVPD
LIWLAVTDADGFIVAATDEQVVGQNVNQHAWISQGLDAAWIEEGRSPQERFLKLTAPVRN
ADGAIIGVVAANLRWNWVQKMMAEIRASPGEWLLIDRDGIVRHGPSALLGQRWQDAGDPI
TPFDPVVAGLGNDGSDLPMRIRTRRLLDNRPYLIATPPNAREGTLRRLGWQAVVIQPVES
VAAFATAIEWRISIVLSLLGLAAAVAGIVMARRLTRRVSVIAHSADAVLAGSATRIEVPQ
GADEAARLGSALDRLLDTLQRERDELRRLNAELDERVRQRTEEINRLAQESRDAAVVRER
LRLARGLHDTLAHSMMAMLTEIRVLKHLASNRPDALPNELVRAERAARDGLDEARRAIDQ
LRSNPVRDIGLGAALAELAKSLGERSGIELDCRIDPALSALAAEPAETVFHMCEEVLRNV
ERHAGAARLLIRLQRMGSDGIELEIADDGIGFEPSAGAAGHYGLVGLREQAEAIGAHLRI
DSRSGEGTRVSLRWRHAGAA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagtcacggccaccggctgcgagaatccgcagccaatgaacctcgcacgtcgc
atcgacccgcggcgctccatggctgccgcgatcggctggctgctgattgcgctcacgctg
tgcctggcgctcgcggccaacctgtggctgcgcagcttcgtgcgtgcgacgctgctcgag
cagcacggccagcgcctggaggccgcggccgagcacgtcagcgccgaactcgacaccgcg
ctgctgctgcgcctgcaggccgtcagcgtggtggcggccatgctgtcggaggacgtgcag
cgcagcgaaggcgcacgcctgaagcgctcgctcgaggcggtgcgccgcggcgtgcccgac
ctgatctggctggcggtgaccgatgccgacggcttcatcgtcgccgccaccgacgaacag
gtggtcggccagaacgtcaaccagcacgcctggatctcgcagggcctggacgccgcatgg
atcgaggaaggccgctcgccgcaggagcgcttcctgaagctcacagcgcctgtgcgcaac
gcagacggcgcgatcatcggcgtggtggccgcgaacctccgctggaactgggtgcagaag
atgatggccgagatccgcgcatcgccgggcgaatggctgctgatcgaccgcgacggcatc
gtgcgccacgggccgagcgcgctcctggggcagcgctggcaggatgccggcgatccgatc
acgcccttcgatcccgtggtcgcgggcctgggcaacgacggatccgatctgcccatgcgc
atccgcacaaggcggctgctggacaaccggccctacctgatcgcgaccccgcccaatgcg
cgcgagggcacgctgcgccggctcggctggcaggccgtggtgatccagccggtcgaatcg
gtcgcggcgtttgcgaccgccatcgaatggcgcatctcgatcgtgctgagcctgctgggc
ctggccgccgcggttgcgggcattgtcatggcgcgccggctcacgcgccgtgtcagcgtg
attgcccattcggccgacgcggtgctggccggcagcgccacgcgcatcgaggtgccgcaa
ggcgccgatgaagccgcgcggctgggcagcgcgctcgaccggctgctggacacgctgcag
cgcgaacgcgacgagctgcgccggctcaacgccgagctggacgaacgcgtgcggcagcgc
accgaagagatcaatcggctcgcgcaggaatcgcgcgatgcggcggtggtgcgcgagcgg
ctgcggctcgcgcgcggactgcacgacacgctggcgcattccatgatggcaatgctcacc
gaaatccgcgtgctcaagcacctggcatcgaaccggcccgatgcgctgccgaacgagctg
gtgcgggccgagcgcgcagcgcgcgacggactggacgaggcacgccgcgcgatcgaccag
ctgcgcagcaacccggtgcgcgacatcgggctgggcgcagcgttggccgagctggccaag
agcctgggcgagcgctccggcatcgagctcgactgccggatcgaccccgccttgtccgcc
cttgcggccgagccggcggaaaccgtgttccacatgtgcgaggaagtgctgcgcaacgtc
gagcggcacgcgggcgcggcacgcctcctgatccgcctgcagcgcatgggaagcgacggc
atcgaactggagatcgcggacgacggcattggcttcgagccgagcgcaggcgccgcgggg
cactacgggctcgtcgggctgcgggagcaggccgaagcgatcggcgcccacctgcgcatc
gacagccgcagcggcgaaggcacccgcgtatcgctgcggtggaggcatgcgggcgcagcc
tga
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