Variovorax paradoxus S110: Vapar_5572
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Entry
Vapar_5572 CDS
T00916
Name
(GenBank) glycosyl transferase family 2
KO
K20534
polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Vapar_5572
Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
O-antigen repeat unit
Vapar_5572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glyco_transf_21
DUF5665
Glyco_tranf_2_4
iSirtuin
Motif
Other DBs
NCBI-ProteinID:
ACS22164
UniProt:
C5D193
LinkDB
All DBs
Position
2:279176..280198
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AA seq
340 aa
AA seq
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MISSTAAEPASASTAAPHAQSATGTQQRSISCVIPCFNEAANLRQLLPLLEETLWATGMR
WEIIVVDDGSTDDTAAVAQAWCELTGFRCICLSRNFGKEAALSAGLAAAAGDAVVVLDGD
LQHSPSLIRAMLDHWKAGAEVVYAVRQERSDESRLKQIGSRIFYRLLNASDRFAVPQDAG
DFRLMDRRVVDALTSLPERSRFMKGLYAWVGFRAVAMPYTPRPRAAGASSFNARRLFALA
IDGLTAFTTWPLRMVSVVGLLFAVPALSYGAYVVLDHLMFGNPVSGWSTIVVSLMFFIGV
QMIFTGIVGEYVARIYEEVKGRPLYVVRRESGVGLEADQP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatctcctcgaccgctgccgaacccgcgtccgcgtccaccgcggccccgcacgcgcag
agcgcgaccgggacgcagcaacgcagcatttcctgcgtgatcccgtgcttcaacgaggcg
gccaacctgcggcaattgctgcccctgctcgaagaaacactctgggccacgggaatgcgc
tgggagatcatcgtcgtggacgatggcagcaccgacgacaccgcggccgtggcccaggcc
tggtgcgaactgacgggcttccggtgcatctgcctgtcgcgcaacttcggcaaggaggcg
gcgctctcggccggcctggcggccgctgcaggcgacgcggtggttgtgctcgacggcgac
ctgcagcactctccgtcgctcatccgcgccatgctggaccactggaaggccggcgcggag
gtggtctatgcggtgcgccaggagcgcagcgacgagagccgcctcaagcagatcggcagc
cggatcttctaccggcttctgaacgcgtcggaccgcttcgcggtgccgcaggatgcgggc
gatttccggctgatggaccggcgggtggtcgatgcgctgaccagcctgcccgagcgcagc
cgcttcatgaagggcctgtatgcatgggtcggcttccgggccgtggccatgccctacacg
cccaggccgcgcgccgcaggcgccagcagcttcaatgcgcggcggctgttcgccctggcc
atcgacgggctcaccgcgttcaccacctggccgctgcgcatggtcagcgtggtggggctg
ctgttcgccgtgcccgcgctgtcatatggcgcctacgtggtcctcgaccacctgatgttc
ggcaacccggtctcgggctggagcacgatcgtggtcagcctgatgttcttcatcggcgtg
cagatgatcttcaccggcatcgtgggtgagtacgtggcgcgcatctacgaagaggtcaag
ggccggccgctctacgtggtccgccgcgaaagcggcgtcggcctcgaggccgaccagcca
tga
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