Variovorax paradoxus S110: Vapar_5585
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Entry
Vapar_5585 CDS
T00916
Name
(GenBank) Dimethylmenaquinone methyltransferase
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00362
Benzoate degradation
vap00660
C5-Branched dibasic acid metabolism
vap01100
Metabolic pathways
vap01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Vapar_5585
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vapar_5585
Enzymes [BR:
vap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
Vapar_5585
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Gene cluster
GFIT
Motif
Pfam:
RraA-like
Motif
Other DBs
NCBI-ProteinID:
ACS22177
UniProt:
C5D1A6
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All DBs
Position
2:292226..292915
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AA seq
229 aa
AA seq
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MSSNPPDIIRNFERVPAHVVAQAAELQPAILADVAGRRGAMHGRIKALRPRMKLAGPAFT
VEVRPGDNLMIHAAIAMARPGDVLVIDGKGDQGSALMGTIMMTACQKLGIAGVVMDGACR
DSLEIDEMDYPVFCVGTNPNGPTKNIAGRIGHPVSVGDVTVRAGDFVIADGDGVVVVERE
KIEALLPAAARKVSDEAARIAAIKEGDTAAKWLNSALRTAGVLKEGETL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaaccctcccgacatcatccgcaatttcgagcgcgtgcccgcgcacgtcgtg
gcgcaggccgccgaactgcagcccgccatcctggccgacgtggccggccgccgaggcgcg
atgcatggccgcatcaaggcgctgcgcccacgcatgaagctggccggccccgccttcacg
gtggaagtgcggcccggcgacaacctcatgatccacgccgccatcgcaatggccaggccc
ggcgacgtgctggtgatcgacggcaagggcgaccaaggctcggcgctcatgggcaccatc
atgatgacggcctgccagaagctcggcatcgcgggcgtggtgatggacggcgcctgccgc
gacagcctcgagatcgacgagatggactaccccgtgttctgcgtgggcaccaacccgaac
ggcccgaccaagaacatcgccgggcgcatcggccatcccgtctcggtcggcgacgtcacg
gtgcgcgcgggcgacttcgtgattgccgacggcgacggcgtggtggtggtcgagcgcgag
aagatcgaggcgctgctgcccgcggcggcccgcaaggtcagcgacgaggccgcacgcatt
gccgccatcaaggaaggcgacaccgcggccaagtggctgaacagcgcactgcgcacggcc
ggcgtgctcaaggaaggagagaccctgtga
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