Variovorax paradoxus S110: Vapar_5586
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Entry
Vapar_5586 CDS
T00916
Name
(GenBank) D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00260
Glycine, serine and threonine metabolism
vap00270
Cysteine and methionine metabolism
vap00680
Methane metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01230
Biosynthesis of amino acids
Module
vap_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Vapar_5586
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vapar_5586
00270 Cysteine and methionine metabolism
Vapar_5586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_5586
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Vapar_5586
1.1.1.399 2-oxoglutarate reductase
Vapar_5586
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Vapar_5586
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACS22178
UniProt:
C5D1A7
LinkDB
All DBs
Position
2:292912..293841
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AA seq
309 aa
AA seq
DB search
MSTIVVTGADLAPQAIALLEGHEIVYAGKTPTEDDLVALCRAHDPVAIIVRYGKVGAAVM
DAAPSLRVISKHGSGTDTIDKAAARARGIEVVAAAGANAAAVAEQALALLLACAKSVVAL
DARMHAGHWDKATHKSLELGGRTIGLIGLGAIGLRFARMADALGMRVIGFDPYAANLPPH
VTPVDLPAIWRESDAISLHCPLTEDNRGMVNAGTLARCKRGVILVNTARGGLVDEAALLA
AVRSGQVGMAGLDSFAVEPMAAGHPFQGEENFVLSPHIGGVTGDAYVNMGVGAAKNVLQV
LARQPVATA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccatcgtggtgaccggcgccgacctggcgccgcaggccatcgcgctgctcgag
ggccacgagatcgtctacgccggcaagacgccgaccgaagacgacctggtggcgctgtgc
cgcgcgcacgaccccgtggccatcatcgtgcgctacggcaaggtcggcgccgcggtgatg
gatgcggcgccctcgctgcgcgtgatctccaagcacggcagcggcaccgacaccatcgac
aaggccgcggcccgggcgcgcggcatcgaggtcgtcgcggcggccggtgcgaatgccgct
gcggtggccgagcaggcactggccctgctgctggcctgcgccaagtcggtcgtggcgctg
gacgcgcgcatgcacgccggccactgggacaaggccacgcacaagagcctcgagctcggc
ggccgcaccatcgggctgatcggcctgggtgcgatcggactgcgctttgcccgcatggcc
gatgcgctgggcatgcgcgtgatcggcttcgatccctatgccgcgaatcttccgccccat
gtgacgccggtcgacctgccggcgatctggcgcgagtcggatgcgatctcgctgcactgc
ccgctgacggaagacaaccgcggcatggtcaacgccggcacgctggcgcggtgcaagcgc
ggcgtgatcctggtgaacaccgcgcgcggcggcctcgtcgacgaggcggcgctgctggcc
gcggtgcgctcgggccaggtcggcatggcgggcctggacagcttcgcggtcgagcccatg
gccgccggccacccgttccagggcgaggagaacttcgtgctgagcccgcacatcggcggc
gtgaccggcgatgcctatgtgaacatgggcgtcggcgcggcgaagaacgtgctgcaggtg
ctcgcacggcagccggtcgccacggcctga
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