Variovorax paradoxus S110: Vapar_5615
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Entry
Vapar_5615 CDS
T00916
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein domain protein
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00190
Oxidative phosphorylation
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap02020
Two-component system
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vap_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_5615
00620 Pyruvate metabolism
Vapar_5615
00650 Butanoate metabolism
Vapar_5615
09102 Energy metabolism
00190 Oxidative phosphorylation
Vapar_5615
00720 Other carbon fixation pathways
Vapar_5615
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_5615
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Vapar_5615
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
ACS22207
UniProt:
C5CZ50
LinkDB
All DBs
Position
2:complement(321783..323522)
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AA seq
579 aa
AA seq
DB search
MNFETYKTDILVLGTGGAGLFAALHAKKANPSLRVTVTVKGLLGKCGCTRMVQGGYNVAL
SAGDSVERHFMDTIEGGKWLPRQDLAWRLVEGAVERVRELENEIGCFFDRNPDGSLHSKA
FAGQSFDRTVHKADLTGIEIINRLMEQVRAMDVEELEEHRAIELIPAADGSGIAGVLFID
MRAGTYRLVQAKAVLLATGAGPTMYRYHTPSGDKTCDGLAMALRYGLKLRDMEMVQFHPT
GLLGGPDTRMTGTVLEEGLRGAGGYLLNGNGDRFMTHYDKRGERATRDVVSRGIYAEMRA
GRTGPMGGVYIQMSHLGPEKVAKTFPGMVNRCKDCGFDLAGGKVEVVPTAHYLMGGVEFN
VDCSTASPGLFAAGEDCGGVHGANRLGGNGVANSTVFGGIAGDSMAAFVERNGKWRDPDR
RIVASGIERAEYPFSRPAGRIHELRDALAQTMWDDVGVLRNREAMDHGLEAVASHRAALS
AMGVADGDRRYNVTWHDWLNLESLVDISKIITVSALARENSRGAHFREDFPDPGDLHSSC
YTRVSARDDHVQLEMIPVSFDIVRPGESLITGEAVTPKT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgagacttacaagaccgatatcctggtgctgggaaccggtggtgccggcctg
tttgctgccctgcatgccaagaaggcgaatccttccctgcgcgtcacggtcacggtcaag
ggtttgcttggaaagtgcggatgcacacgcatggtccagggcggctacaacgtggcactg
tcggctggagattcggttgagcggcacttcatggacaccattgagggcggcaagtggctg
ccgcgtcaggatctcgcatggcgcctcgtggaaggggccgtcgagcgcgtgcgcgaactc
gagaacgagatcgggtgcttctttgaccgcaatcccgacgggtcgctccattcgaaagcc
tttgcgggccagagcttcgatcgcacggtccacaaggccgacctgacgggcatcgagatc
atcaaccgcctcatggagcaggtgcgcgcgatggacgtcgaggagcttgaggagcatcgt
gcgatcgagctcattccggcggccgatggatccggaatcgccggtgtcctgttcattgac
atgcgtgcaggtacctatcgcctggtgcaggcaaaggcggtgctccttgcgacgggcgcc
gggccgacgatgtaccgctatcacacaccgtccggcgacaagacctgcgatggtctggcc
atggcgcttcggtacggcctgaagctccgggatatggagatggtgcagttccatcccacc
ggactcctcggcggaccggatacgcgtatgacgggcaccgttctcgaggagggcttgcgc
ggcgccggtggttacctgctcaatgggaacggcgaccggttcatgacccactacgacaag
cgtggcgagcgtgcgacccgcgacgtcgtcagtcgaggcatctacgccgagatgcgcgcg
gggcgtacggggccgatgggtggcgtctacatccagatgagccacctcggcccggagaag
gtcgccaagacctttcctggaatggtcaatcgctgcaaggactgcggctttgatctggca
ggtggcaaggtcgaagtggttccgacagcccactacctgatggggggtgtcgagttcaac
gtcgactgctcgaccgcatcgccaggactgttcgctgcgggcgaggactgcggaggcgtc
catggggccaatcgcctcggcggcaacggtgtcgcgaactccaccgtctttggcggcatt
gcgggagactccatggccgccttcgtcgagaggaacggcaagtggcgcgaccccgacagg
cgaatcgtcgccagcgggatcgagcgcgcggagtatccgttctccaggccggcgggtcgt
atccacgagttgcgcgacgccctggcacagacgatgtgggatgacgttggtgtgctgcgc
aaccgtgaggcgatggaccatgggctcgaagcggtggcttctcatcgagccgcgctgtcg
gcgatgggcgtcgcagatggcgatcgccgctacaacgtgacctggcacgactggctgaac
ctggaaagcctcgtcgatatctcaaagatcattaccgtctccgcgctggcacgcgagaac
agccggggcgctcattttcgcgaagacttccccgacccgggcgatctccactccagctgc
tacacgcgcgtgagcgcccgggacgaccatgtacagctcgaaatgattcccgtctccttc
gacatcgtgagacccggtgaatcgctcatcaccggcgaagcagtcacccccaaaacctga
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