Variovorax paradoxus S110: Vapar_5618
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Entry
Vapar_5618 CDS
T00916
Name
(GenBank) succinate dehydrogenase and fumarate reductase iron-sulfur protein
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00190
Oxidative phosphorylation
vap00620
Pyruvate metabolism
vap00650
Butanoate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap02020
Two-component system
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vap_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_5618
00620 Pyruvate metabolism
Vapar_5618
00650 Butanoate metabolism
Vapar_5618
09102 Energy metabolism
00190 Oxidative phosphorylation
Vapar_5618
00720 Other carbon fixation pathways
Vapar_5618
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_5618
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Vapar_5618
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_7
Fer2
Fer4_9
Fer4_10
Fer2_4
DHODB_Fe-S_bind
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
ACS22210
UniProt:
C5CZ53
LinkDB
All DBs
Position
2:complement(324202..324936)
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AA seq
244 aa
AA seq
DB search
MDTDKPTKQRQLTVRISRGTGDGSLSTYSVPWRENQTVLDVVTEVQRTQEPDLSYRFACR
VGVCGSCAMTVNGKPRWTCRTHVSRVEEGGVIVIEPLRNMPRIKDLVVDMREFFQKWKKA
GSTFVGTATRNDPPARVSPQSKKRRLADAAIECINCGVCYAACDVVTWDKDYLGPAALNR
AWTLYNDERHADPKDVLHKATSGGGCNSCHTQGSCMKHCPVSLSPTGSIAGLKRSALLSF
LKRD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacaaacccacgaagcagagacaactcaccgtacgaatctctcgaggaacc
ggcgatggctccttgtcgacgtactcggtcccctggcgcgaaaaccagaccgtgctggac
gtcgtgacggaggtccaacggacccaggagccagacctttcctatcgattcgcgtgtcgc
gttggcgtgtgcggctcctgtgcgatgacggtcaacggaaagccccgctggacctgccga
acccatgtcagccgcgtggaagaggggggggtcatcgtcatcgagccccttcgcaacatg
ccgcgcatcaaggacctcgtggtcgatatgcgcgagttctttcaaaagtggaaaaaggcg
ggcagtacctttgttggcacggcaacacggaatgatccgccggcacgggtgtctccccag
agcaagaagcgcaggctggcagatgccgcgatcgaatgcatcaattgcggcgtgtgctat
gccgcctgtgacgtcgtcacctgggacaaggactacctgggaccagccgcgctcaatcgt
gcctggaccctctacaacgacgaacggcatgcggatcccaaggacgttttgcacaaggcc
acgtccggtggcggctgcaattcgtgccacacgcaaggcagttgcatgaagcattgcccg
gtcagcctgagcccgaccggcagcattgcgggactgaagcgaagtgcgctcctgagtttc
ctcaagcgagactga
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