Variovorax paradoxus S110: Vapar_5644
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Entry
Vapar_5644 CDS
T00916
Name
(GenBank) transcriptional regulator, GntR family with aminotransferase domain
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5644
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Vapar_5644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ACS22236
UniProt:
C5CZ83
LinkDB
All DBs
Position
2:350669..352114
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AA seq
481 aa
AA seq
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MIQEKKPPAALLAIDRAASTPLHRQIYERFRTAIEQGLLRPGDRVASARSLASELGVARG
TIEAAYNQLAGEGYFSPQGQAGTVVSPSLPSPRSARRTSRQAEARAVEHDLADPAPPPPL
QLGIPALDAFPRKLWSRLVSRRARAMAAADMFYGDPSGHPPLRTAIAAYLRVSRGVACHP
SLVFVTGGYRASLALISHALLAKDERVWVEDPGYPPTQEVLRSAGQRTVPVPVDEEGLVV
ARGMRKAAKAKTAVVTPSHQAPLGVSMSLARRLQLLDWASQAKAWIVEDDYDGEYRYTGL
PLPALKSLDRHDRVLYAGSFSKVLYPGLALGYVVVPDALRGAFDEAARTGSNGCPQLTQA
VVADFMREGHFSRHLKKMRLLYARRRHMLAAALQKAFGDEVRIDLQAGGMHLIARFDRRR
ESDAELARRAQRAGLNCQPLSARGTAGFRDEGLLMGFTNVGSALHAQQLAAKLHKALGRE
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagagaagaaaccgcccgccgccctcctcgcgatcgaccgcgcagcgtccacg
ccgctgcaccggcagatctacgagcgcttccgcacggccatcgagcagggcctgctccgc
ccgggcgaccgcgtggcctcggcgcgcagcctggccagcgaactgggcgtggcgcgcggc
accatcgaggcggcctacaaccagctcgcgggcgaaggctatttctcgccgcagggccag
gccggcacggtggtctcgccctcgctgccctccccgcggtcggcgcgccgcacgtcccgg
caagccgaggcgcgggccgtggagcacgacctggccgatcccgcgccgccaccgcccctg
cagctgggcattccggcgctcgatgccttcccgcgcaagctctggtcgcgcctggtgtcg
cgccgcgccagggcgatggccgcggccgacatgttctatggcgacccctcgggccatccg
ccgctgcgcaccgccattgccgcctacctgcgggtgtcgcgcggcgtcgcatgccatccg
tcgctggtcttcgtgaccggcggctaccgcgcatcgctcgcgctcatctcgcacgcgctg
ctcgccaaggacgagcgcgtgtgggtggaggacccgggctatccgccgacgcaggaggtg
ctgcgcagcgccggccagcgcacggtgcccgtgccggtcgatgaagaaggcctggtcgtt
gcgcgcggcatgcgcaaggcagcgaaggcgaagacggccgtcgtcacgccctcgcaccag
gcgccgctcggcgtctcgatgtcgctcgcccgccggctgcaactgctcgactgggcctcg
caggcgaaggcctggatcgtcgaggacgactacgacggcgaataccgctacaccggcctg
ccgctgcccgcgctcaagagcctcgaccgccatgaccgcgtgctctacgccggcagcttc
tcgaaggtgctgtatcccggactggcgctcggctacgtggtggtgcccgatgcgctgcgc
ggcgccttcgacgaggccgcgcggaccgggtccaacggatgcccgcagctcacgcaggcg
gtggtcgccgatttcatgcgcgaaggccatttctcgcgccacttgaagaagatgcggctg
ctctatgcgcgccgccgccacatgctcgcggccgcgctgcagaaggccttcggtgacgaa
gtgcgcatcgacctgcaggccggcggcatgcacctgatcgcgcgcttcgaccggcggcgc
gagagcgacgcggaactggcacgccgggcgcaacgcgccggactgaactgccagccgctg
tccgcgcggggcacggcaggtttccgggacgaggggctgttgatgggcttcaccaatgtt
ggctcggcgctgcatgcgcagcagctcgcggcgaagctgcacaaggccttgggccgcgag
ccctga
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