Variovorax paradoxus S110: Vapar_5744
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Entry
Vapar_5744 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_5744
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_5744
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
MarR_2
OpuAC
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ACS22333
UniProt:
C5CZT3
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All DBs
Position
2:450445..451749
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AA seq
434 aa
AA seq
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MTGRRQLQDKVIDRTHTHALGLNLRHLRAFTAVAAAGSIARAADEQLFRVASGVTRSISE
LEGALGRPLFDRGPRGMALNSYGDLVLLRARRIEREFEEARAQLVARGGIGASADVHSLF
ASILNGRRLAVIASLVEKRNMPAVAREFGITQPAISSALKDLEGGLGVALLERRTRGLVP
TPAGEMVAFHFKRVLAELRHIGPDIAASEGMLQGSVNVGALPLGRTQILPQAIASLLARH
PGLHVATVESPYDALAASLRSGDIDFILGALRSSADARDLQQEALFEDRISVIARAGHPL
ARGVRVDFDALRQASWALSRQGTPSRELLERFFSAAREAPPVPAVETGDLAVLRGLLLAS
DMLTAISAHQLRHEIRNASLVVLDFPLDETRREIGLTQRLGAFPSPGARALMQEIRAVVA
RSPDFRAKPANRRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccgacgccagctgcaagacaaagtgatcgaccgcacgcacacccatgcgctg
ggcctcaacctgcggcacctgcgcgcgttcacggccgtggcggcggccggcagcatcgcc
agggccgcggacgagcagctgttccgcgtcgcctcgggcgtgacgcgctccatttccgag
ctcgaaggcgcgctcggccggccgctgttcgaccgcggcccgcgcggcatggcgctgaac
tcctacggcgacctggtgctgctgcgcgcgcgccgcatcgagcgcgagttcgaggaggcg
cgcgcccagctcgtcgcgcgcggcggcatcggcgcatcggccgacgtgcactcgctcttt
gcatcgatcctcaacggccggcgcctcgcggtgatcgcgagcctggtggagaagcgcaac
atgccggcggtcgcgcgcgagttcggcatcacgcagccggcgatcagcagcgcgctgaag
gacctcgaaggcgggctcggcgtggcgctgctcgagcgccggacgcgaggcctggtgccc
acgccggccggcgagatggtggccttccatttcaagcgcgtgctcgcggagctgcgccac
atcggccccgacatcgcggccagcgaaggcatgctgcagggcagcgtgaacgtgggggcg
ctgccgctcggccgcacgcagatactgccgcaagcgatcgcctcgctgctggcgcgccat
ccggggctgcacgtcgccacggtcgaaagcccttacgacgcgctggcggcgtcgctgcgc
agcggcgacatcgacttcatcctcggcgcactgcgcagcagcgccgacgcgcgcgacctg
caacaggaggcgctgttcgaagaccgcatctcggtgatcgcgcgcgccggccatccgctg
gcgcgcggcgtgcgtgtcgacttcgatgcgctgcgtcaggcgagctgggcactctcgcgg
cagggcacgccttcgcgcgagctgctcgagcgctttttctcggccgcgcgcgaagcgccg
ccggttcccgcggtggagaccggcgaccttgccgtgctgcgcggcctgctgctcgcaagc
gatatgctgaccgcgatctccgcccaccagctgcgccacgagatccgcaatgccagcctg
gtggtgctggactttccgctcgacgagacgcggcgcgagatcggcctcacccagcgcctc
ggcgcgttcccctcgcccggtgcgcgcgcgctgatgcaggagatccgcgcggtggtcgcc
cgctcgcccgacttccgggccaagcccgcgaaccgccgccggtga
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