Variovorax paradoxus S110: Vapar_5773
Help
Entry
Vapar_5773 CDS
T00916
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K00666
fatty-acyl-CoA synthase [EC:6.2.1.-]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vap01004
]
Vapar_5773
Lipid biosynthesis proteins [BR:
vap01004
]
Acyl-CoA ligase
Unknown
Vapar_5773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF5324
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACS22362
UniProt:
C5D018
LinkDB
All DBs
Position
2:477473..479164
Genome browser
AA seq
563 aa
AA seq
DB search
MNARPPHFRFWPKGVARELRVPRATLPDYLDTAARRYPGKPAIVYCGAATSYAQLRERVD
ALAGYLQQRLGVAPGDRVLLASQNCPQFVTAFYAVLRAGAVVVPVNPMSKAAEVRHYAAD
SGARIAFVAQELLPVLAFGEGEGELRAALVHAYADAIDASASDDALPGWVTAPRAPLDDA
RLHGFEQAIALGLAPAALPLLPDDLAVLPYTSGTTGHPKGCMHTHATLLASLASSAVWKQ
LHVETVTLAVAPLFHMLGLQNGMNLPMFLGATAVMMPRWDPAMAARLIERHAVTAWSAPP
AMVIDLFSHAEAERRDLSSLALLSGGGAAMPEAVAAMLLQRRGLSYNEGYGLTETASFLH
ANPPARGKRQCLGTPTQGVDSRIVDPVTFEELPPGEVGELVTRGAQLMKGYWRNPEADRE
AFIEIGGQRFFRTGDLASMDEDGYFFLRDRLKRMINASGYKVWPTEVENAMYEHPAIHEA
CVIAVPDGRRGESVKALVVLKPALRGHVAEEDIVAWCRERMAVYKAPRVVEFLDSLPKSG
TGKILWRELQEAQRAAAQEQAHP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaggccgccgcacttccgcttctggcccaagggcgtggcgcgcgagctgcgc
gtgccgcgcgccacgctgcccgactacctggacaccgcggcgcgccgctatcccggcaag
cccgccatcgtctactgcggcgcggccacctcctatgcgcagctgcgcgaacgcgtcgac
gcgctggccggctacctgcagcagcgcctgggcgtcgcgcccggcgaccgcgtgctgctc
gcgagccagaactgcccgcagttcgtgacggccttctacgccgtgctgcgcgcgggcgcc
gtggtggtgccggtgaacccgatgagcaaggccgcggaggtgcggcactacgcggcagac
agcggtgcgcgcatcgccttcgtcgcgcaggagctgctgcccgtgctcgcgttcggcgaa
ggcgaaggcgagctgcgcgccgcgctcgtccatgcctatgccgacgcgattgatgcgtcg
gcgagcgacgacgcgctgcccggctgggtcacggcgccgcgcgcgccactcgacgacgcg
cgactgcatggcttcgagcaggcgatcgcgctcggcctcgcgcccgcggcattgcccctg
ttgcccgacgacctggccgtgctgccctacacctcgggcaccacaggccacccgaagggc
tgcatgcacacccatgcgacgctgctggcctcgctcgcttcctcggcggtgtggaagcag
ctgcatgtggagacggtcacgctggccgttgcgccgctcttccacatgctgggcctgcag
aacggcatgaacctgccgatgttcctgggcgccaccgcggtgatgatgccgcgctgggac
ccggcgatggccgcgcgcctgatcgagcgccatgcggtcacggcctggtcggcgccgccg
gcgatggtgatcgacctgttctcccacgccgaagccgagcggcgcgacctctcgagcctg
gcgctgctgtcgggcggcggcgccgcgatgcccgaggcggtggccgccatgctcctgcag
cgccgcggcctttcgtacaacgaaggctatggcctgaccgagaccgcatccttcctgcac
gccaatccgcccgcacgcggcaagcgccagtgcctgggcacgccgacgcagggcgtggac
tcgcgcatcgtcgatccggtcacgttcgaggaactgccgcctggcgaggtgggcgagctg
gtcacgcgcggcgcgcagctcatgaagggctactggcgcaacccggaggctgaccgcgag
gccttcatcgagatcggcggccagcgcttcttccgcaccggcgacctggcctcgatggac
gaggacggctacttcttcctgcgcgaccggctcaagcgaatgatcaatgcctcgggctac
aaggtctggcccaccgaagtggagaacgcgatgtacgagcatccggccatccacgaggcc
tgcgtgatcgcggtgcccgacggcaggcgcggcgaatcggtcaaggcgctggtggtgctc
aagcccgcgctgcgcggccacgtcgccgaagaggacatcgtcgcctggtgccgcgagcgc
atggccgtctacaaggcgccgcgcgtggtcgagtttctcgacagcctgccgaagtccggc
accggaaagatcctctggcgcgaactgcaggaagcgcagcgcgccgctgcccaggagcaa
gcacacccatga
DBGET
integrated database retrieval system
