KEGG   Variovorax paradoxus S110: Vapar_5821
Entry
Vapar_5821        CDS       T00916                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K03195  type IV secretion system protein VirB10
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_5821
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_5821
Secretion system [BR:vap02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Vapar_5821
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ACS22410
UniProt: C5D066
LinkDB
Position
2:526344..527681
AA seq 445 aa
MTWMSEPRRVSRTDPQEHGDAPEIDQNTGEILSAQRAAAPGDGAFQAADERPTIHGERAI
PSVNRERSIQSRISGFLALTAIMLLGAGFLFWYYNTRYAKTQEAEEAARKAAAARAGGEM
KVPPLGRINPPRAAPEAAATAAPPSPPPPPANSANTGPPQKTPEQIALERQLGAPVLRRA
QAAQARSATTPHALADPAMLPAGGVPSMAQLIGALQPPHASLAAPGGGQLAASLRPTPTP
AVVAQTLPTRRMLLPKGAFIDCTLETAIDSTYEGMTTCIGASDVYGADGKVVLLERGTKY
VGEQRGTPRQGQGRVFIVWNEARTPTGVVVQLASPGTDELGRSGLPGFVDTHFWDRFGAA
VLISVIDGTMQTIAAHEQSGTSVGSGGGVVLAPQGSRDVITEVLRSTVSIPPTVIKNQGE
RIQILVARDVDFRSVYALRTEPAIP
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgacctggatgagcgagccccgccgcgtgtcccggaccgatccccaggagcatggcgac
gcgcccgagatcgaccagaacaccggggagatcctgtcagcgcagcgagccgcagctccg
ggagacggggcgttccaggcagccgacgagcgcccgacgatccatggcgagcgggccatt
ccatcggtcaatcgcgagcgctccatccagtcgcgcatcagcgggttcctggcactgacg
gcgatcatgctgctgggcgccggattcctgttctggtactacaacacccggtatgccaag
acccaggaggccgaagaggctgcgagaaaggcggcggctgcgcgcgccggcggcgagatg
aaggttccgccgctcggccgcatcaatccgcccagagcggcgccggaagcagcagcgacc
gccgctccgccctccccgccgccaccgccggcgaacagcgccaacacgggaccgccgcag
aagacacccgagcagatcgcactggaacgacagctgggcgccccggtgcttcggcgcgcc
caagccgctcaggcgcgcagcgccaccacgccgcacgcgctcgcggatccggcgatgctg
cctgccggcggcgtgccaagcatggcccagctgatcggtgcgctgcagccaccccacgcc
agtttggcggcacccggcggcggtcagctcgccgccagccttcggcccacgccgacgccg
gcggtggtcgcccagaccctgccgacacggcgcatgcttttgcccaagggcgcgttcatc
gactgcacgctggaaaccgccatcgattccacctatgagggcatgaccacctgcatcggc
gcgagcgacgtttacggggccgacggcaaggtcgtgctgctggagcgtggcaccaagtac
gtcggcgaacagcgtggaacgccgcgacagggacagggtcgcgtcttcatcgtctggaac
gaagcgcgcacgccgaccggcgtcgtggtccagctggcgtccccgggcaccgacgaattg
gggcgcagcggcctccccggcttcgtcgacacccatttctgggatcgcttcggtgccgcg
gtcctgatctcggtgatcgacggcacgatgcagacgatcgccgcccacgagcaaagcggc
acgtctgtcggtagcggcggcggcgtggtgctcgctccccagggcagccgcgacgtcatc
acggaggtgctgcgcagcaccgtgtcgattccgccgaccgtgatcaagaaccagggcgag
cggatccagatcctggtcgcccgcgatgtggatttcaggagcgtctatgcgcttcgaacc
gaaccggccatcccttga

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