Variovorax paradoxus S110: Vapar_6024
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Entry
Vapar_6024 CDS
T00916
Name
(GenBank) Radical SAM domain protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_6024
Enzymes [BR:
vap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Vapar_6024
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vapar_6024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ACS22592
UniProt:
C5D0W1
LinkDB
All DBs
Position
2:748546..749601
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AA seq
351 aa
AA seq
DB search
MRIHELKQRLREAGAGPSHEQRILRLWSHALPRNSGRRLPESFFPSSLLAALPAIEAELA
GLARIHAVHPGADGSERLLVALADGQTVESVLLPRDGLCVSSQVGCAVGCRFCMTGRDGL
LRQVGSAEIIAQVALARMRRPVRKVVFMGMGEPAHNLDNVMEAIELLGTVGNIGHKNLVF
STVGDPRAFERLQQARVRPALALSLHTTKAGLRKKLLPRAPNMTPEELVGAGERYARATG
YPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFGVLNMIPFNAVEGVAFSRPSLERCEQMAR
TLHQRGILTKLRHSAGQDVDGGCGQLRARAAEARVVPIRFAQPSEATQSQT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccacgaactgaaacagcggctgcgggaagccggtgcaggccccagccacgag
cagcgcatcctgcggctgtggtcccacgcactgccgcgcaacagcggccggcgcctgccg
gagagcttctttccgtcgtcgctgctggcggccctgcccgccatcgaagcggagctggca
ggcctggcgcgcatccacgcggtgcatcccggcgccgatggctccgagcggctgctggtc
gcgctggcggacgggcagacggtggagagcgtgctgctgccgcgcgacgggctttgcgtc
tcgtcgcaggtgggctgcgcggtcggatgccggttctgcatgacgggccgcgacgggttg
ctgcgccaggtgggcagcgccgagatcattgcgcaggtcgcgctcgcgcgcatgcgccgg
ccggtgcgcaaggtggtgttcatgggcatgggcgagcccgctcacaacctggacaacgtg
atggaggcgatcgagctgctcggcacggtgggcaacatcggccacaagaacctggtgttc
tcgaccgtgggcgatccgcgcgcgttcgagaggctgcagcaggcgcgtgtcaggcccgcg
ctggcgctctccttgcacaccaccaaggccggcctgcgcaagaagctgctgccgcgcgcg
ccgaacatgacgcccgaggaactggtcggcgcaggcgagcgctacgcccgggccaccggc
tatccgatccagtaccagtggacgctgctggacggcgtcaacgacgggcccgaggagatc
gacggcatcgtgaggctgctctccggcaagttcggcgtgctgaacatgatccccttcaac
gccgtggagggcgtggccttcagccgtccgtcgctggagcgctgcgaacagatggcgcgc
acgctgcaccagcgcggcatcctgaccaagctgcgccattcggccggccaggatgtcgac
ggcggctgcggccagctgcgggcgcgcgcggccgaggcaagggtggtgccgattcggttc
gctcagccgagcgaggccacccaatcccagacctga
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