Variovorax paradoxus S110: Vapar_6060
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Entry
Vapar_6060 CDS
T00916
Name
(GenBank) Mandelate racemase/muconate lactonizing protein
KO
K01856
muconate cycloisomerase [EC:
5.5.1.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00361
Chlorocyclohexane and chlorobenzene degradation
vap00362
Benzoate degradation
vap00364
Fluorobenzoate degradation
vap00623
Toluene degradation
vap01100
Metabolic pathways
vap01120
Microbial metabolism in diverse environments
vap01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vapar_6060
00364 Fluorobenzoate degradation
Vapar_6060
00361 Chlorocyclohexane and chlorobenzene degradation
Vapar_6060
00623 Toluene degradation
Vapar_6060
Enzymes [BR:
vap01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.1 muconate cycloisomerase
Vapar_6060
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GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
MAAL_C
Motif
Other DBs
NCBI-ProteinID:
ACS22626
UniProt:
C5D0Z8
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All DBs
Position
2:complement(781482..782642)
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AA seq
386 aa
AA seq
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MPTIQSIETLLVQLPTRREHKWTGLTESIGRYLLTRVVDSDGRTGWGEAPALKDWGGEFG
RYFGESTLIAKTVIEKYLAPSLIGVELGNFAEMHARMDAVIRGYPYAKAAVEFAAYDVTG
RWLGLPVHMLLGGKVRPRVMVTHSIGLIPIAEAEKEVAQVAAEGIKTIKIKIGVDAKRDI
DMVRTIRGAVGDDIELCVDANEGYRTPGEAIATVRAMEPYRLKYVEQPVMGIERIAEVAR
AIDPPVMADESAWNAHDVIQISERRAAQIVSIYSTKPGGLYKAMEVAAVCRAAGIICNVN
GSVETGIGNLANVHLAAAAPAATLSCVVPVSTPAEWQHGQVGGIYYRDDLIVAPMKLVDG
GIEVPTAPGMGIDVDLAKVEKYTVRD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgatccaatccatagaaacgttgcttgttcagcttcccacgcgcagagaacac
aaatggaccggcctgaccgaatccatcggccgttatctgctgacccgcgtcgtcgacagc
gacggccgcacaggctggggcgaggcgcctgcgctaaaagattggggcggcgaatttggg
cgctacttcggcgagtccacgctcatcgccaagacggtgatcgagaagtaccttgcacca
tcgctgattggtgttgagctcgggaatttcgcggagatgcatgcacgcatggacgcggta
atccgtggctatccgtacgccaaggccgcggtcgaattcgccgcttacgacgtcacgggc
cggtggctcggcctgccagtgcacatgctgctcggtggcaaggtgcgaccgcgcgtgatg
gtgacgcattcgatcggcttgatcccgatcgcagaagccgaaaaggaagtggcgcaggtt
gctgccgaaggtatcaagacgatcaagatcaagatcggcgttgatgccaagcgtgacatc
gacatggtgcggaccatccggggggcggtgggcgacgacatcgaactgtgcgtcgatgcg
aacgagggctatcgaacgcccggcgaagccatcgcgacggtgcgtgcgatggagccgtac
cggctcaaatacgtggagcaaccggtgatgggcatagaacgcatcgcggaagtggcgcgg
gccatcgacccgccggtgatggccgacgaatcggcatggaacgcgcacgacgtgatccag
atcagcgagcggcgcgcggcgcagatcgtatcgatctacagcaccaaacccggcggcctc
tacaaggccatggaggtcgcggccgtgtgtcgcgcggccgggatcatctgcaacgtcaat
ggctcggtcgagaccggcataggcaacctcgccaacgtccatctggccgctgcggcgcct
gcggccacgctgtcgtgcgtggtgcccgtgtcaacgccggctgaatggcagcacggccaa
gtcggcggcatctactaccgcgacgacctgatcgtcgctcccatgaagctcgtcgatggc
ggcatcgaggtgccgacggcaccgggcatgggcatcgacgtcgatctggccaaggtcgag
aagtacaccgtccgcgactga
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