Variovorax paradoxus S110: Vapar_6141
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Entry
Vapar_6141 CDS
T00916
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_6141
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Vapar_6141
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACS22704
UniProt:
C5D1D4
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Position
2:complement(862060..863091)
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AA seq
343 aa
AA seq
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MADAPDRPRPRSSSHVTLDDVARVSGVSPITVSRALRGARNVAPELKARVQAAVDQLGYV
PNVAARALASARSSHVAVLIPSLTNQLFVELLEAVQDALAPHGYQSLIGVTHYDPAQEEA
LLRSHLSQRPAGLLLTGFDRSAAAAQMLERSHAPCVYMMETSAAPGVHSVGFSQRDAGRA
ITRHLLQRGRRRIAYAAGQLDPRVLLRLEGYREALREAGCHDPALELLVPGPTSMALGGR
QFEDLLARHPDVDAIFYCNDDLAQGGLLAALRSGVPVPQRVAIAGFNDLGGSDQMLPPLT
TVRTPRKEMGERAAGMLLALMRAETVAERTVDLGFELVVRESS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcccccgaccgcccccgaccccgttcctcgagccacgtcacgctggacgac
gtggcccgcgtctcgggcgtgagcccgatcaccgtgtcacgcgcgctgcgcggcgcgcgc
aacgtggcgcccgagctgaaggcccgcgtgcaggcggcggtcgaccagctgggctacgtg
cccaacgtggcggcgcgcgcgctggcttcggcgcgcagctcccacgtggcggtgctgatt
ccctcgctgaccaaccagctcttcgtggaactgctcgaggcggtgcaggacgcgctcgcg
ccgcacggctaccagtcgctcatcggcgtgacccactacgaccccgcgcaggaagaggcg
ctgctgcgcagccacctctcgcagcgcccggcgggcctgctgctgacgggcttcgaccgc
agcgccgcggccgcgcagatgctcgagcgcagccatgcgccctgcgtgtacatgatggaa
acctcggccgcgcccggcgtccacagcgtgggcttttcgcagcgggacgcgggccgcgcc
atcacccggcacctgctgcagcgcggccgccggcgcattgcctatgccgccggccagctc
gacccgcgcgtgctgctgcgcctggagggctaccgcgaggcgctgcgcgaggccggctgc
cacgacccggcgctcgaactgctggtgccgggcccgacctccatggcgctgggcggccgc
cagttcgaggacctgctcgcgcgccacccggacgtggatgccatcttctactgcaacgac
gacctcgcccagggcgggctgctcgccgcgctgcgcagcggcgtgcccgtgccgcagcgc
gtggcgatcgccggcttcaacgacctgggcggcagcgaccagatgctgccgccgttgacc
accgtgcgcacgccgcgaaaggaaatgggcgagcgcgcggccggcatgctgctcgcgctg
atgcgcgccgagaccgtggcggagcgcacggtggacctggggttcgagttggtggtgcgg
gagagcagctga
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