Variovorax paradoxus S110: Vapar_6323
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Entry
Vapar_6323 CDS
T00916
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_6323
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
Other families
Vapar_6323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
GAF
HTH_8
Mg_chelatase
AAA_2
AAA
AAA_16
GAF_2
AAA_3
HTH_AraC
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACS22885
UniProt:
C5D1W5
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Position
2:complement(1060080..1061657)
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AA seq
525 aa
AA seq
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MTTNSVSSTTSEAAAATEAQRYRSLLAAARGLVRCDAAALLRLDGDVLRPLAVDGLSDET
LGRQFPVASHPRFARLLESERGLRFAHDCGLPDPYDGLVAGQPGILPVHDCMGAPLRLRG
ATWGLLTLDALDAGTFEAVGPAQLDALVALVETGIEAAHTIQEMEARAMREQAVAQALRS
GRGATRELLGSSPAMKQLCSEIDTVAVSDLTVLVLGETGVGKDLVAQRLHARSRRSDQPL
VQVNCAALPETLADSELFGHKRGAFTGAVQDRNGKFEIADGGTLFLDEVGELPLTVQAKL
LRVLQSGELQRPGSDRTLKVDVRVIAATNRDLPAAIAQGRFRADLYHRLSVYPLVVPPLR
ERGRDVVALAGGFLEENQHRLGARNLRLSPAAKAALLAHGWPGNVRELEHVISRASLRAF
REQRRGARWTAIEPHHLALEAAAAGGPAASPAPPAPAPAGQHAGVASGGATLREATEAFQ
RAWLADALARHRGHVANAAREAGIDRSNFHRTLRKLGVPRPESTP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaacagtgtcagttcgaccacaagcgaagcggccgcggccactgaggcgcag
cgctaccgctcgctccttgccgccgcccgcggcctcgtgcgatgcgatgccgccgcgctg
ctgcggctcgacggcgacgtgctgcggccgctggccgtggacggcctgagcgacgaaacc
ctggggcggcagttccccgtggcctcgcacccgcgctttgcccgcctgctcgagagcgag
cggggtctgcgcttcgcgcacgactgcggcctgcccgacccgtacgacggcctggtcgcg
ggccagccgggcatcctgcccgtgcacgactgcatgggcgcgccgctgcgcctgcgcggc
gccacctggggcctcctgacgctggacgcgctcgacgccggcaccttcgaggccgtgggc
ccggcgcagctcgacgcgctggtggcgctggtcgagaccggcatcgaggccgcccacacg
atccaggagatggaagcgcgcgcgatgcgcgagcaggccgtcgcccaggccctgcgctcg
ggccgcggcgccacgcgcgagctccttggcagcagcccggcaatgaagcagctgtgcagc
gagatcgacacggtcgcggtgtccgacctcacggtgctggtgctcggcgagaccggcgtg
ggcaaggacctggtggcgcagcgcctgcatgcgcgctcgcgccgcagcgaccagccgctg
gtgcaggtgaactgcgcggcgttgcccgagacgctggccgacagcgagctcttcggccac
aagcgcggcgccttcaccggcgcggtgcaggaccgcaacggcaagttcgagatcgccgat
ggcggcacgctctttctcgacgaggtgggggagctgccgctgacggtgcaggccaagctg
ctgcgcgtgctgcaaagcggcgagctgcagcggcccggcagcgatcgcacgctgaaggtc
gacgtgcgcgtgatcgcggccaccaaccgcgacttgcctgcggcgatcgcgcaggggcgc
ttccgggccgatctctaccaccggctctcggtctatccgctggtcgtgccgccgctgcgc
gagcgcggccgcgacgtggtggcgcttgcgggcggcttccttgaagagaaccagcatcgc
ctgggcgcgcgcaacctgcggctgtcgccggccgccaaggccgccctgctcgcgcacggc
tggcccggcaacgtgcgcgagctggagcatgtgatcagccgcgcgtcgctgcgcgccttc
agggagcagcgccgcggcgcgcgctggacggcgatcgagccgcatcacctggcgctggag
gctgcggcggccggcggtccggcagcgtcgcctgcgccacctgcaccggcgccggcaggc
cagcacgcgggcgttgccagtggcggcgccacgctgcgcgaagccaccgaggccttccag
cgcgcctggctcgccgatgcgctggcgcggcaccgcgggcacgtggccaatgcggcgcgc
gaggccggcatcgaccgcagcaatttccaccggacgctgcgcaagctgggcgtgccgcgg
ccggaaagcacgccctga
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