KEGG   Vibrio aquimaris: FIV01_01105
Entry
FIV01_01105       CDS       T06969                                 
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vaq  Vibrio aquimaris
Pathway
vaq00010  Glycolysis / Gluconeogenesis
vaq00020  Citrate cycle (TCA cycle)
vaq00260  Glycine, serine and threonine metabolism
vaq00280  Valine, leucine and isoleucine degradation
vaq00310  Lysine degradation
vaq00380  Tryptophan metabolism
vaq00620  Pyruvate metabolism
vaq00630  Glyoxylate and dicarboxylate metabolism
vaq00640  Propanoate metabolism
vaq00670  One carbon pool by folate
vaq00785  Lipoic acid metabolism
vaq01100  Metabolic pathways
vaq01110  Biosynthesis of secondary metabolites
vaq01120  Microbial metabolism in diverse environments
vaq01200  Carbon metabolism
vaq01210  2-Oxocarboxylic acid metabolism
vaq01240  Biosynthesis of cofactors
Module
vaq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vaq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vaq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vaq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vaq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FIV01_01105 (pdhD)
   00020 Citrate cycle (TCA cycle)
    FIV01_01105 (pdhD)
   00620 Pyruvate metabolism
    FIV01_01105 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    FIV01_01105 (pdhD)
   00640 Propanoate metabolism
    FIV01_01105 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FIV01_01105 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    FIV01_01105 (pdhD)
   00310 Lysine degradation
    FIV01_01105 (pdhD)
   00380 Tryptophan metabolism
    FIV01_01105 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FIV01_01105 (pdhD)
   00670 One carbon pool by folate
    FIV01_01105 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vaq04147]
    FIV01_01105 (pdhD)
Enzymes [BR:vaq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FIV01_01105 (pdhD)
Exosome [BR:vaq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FIV01_01105 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA Lys_Orn_oxgnase HI0933_like DAO FAD_binding_2 FAD_oxidored AlaDh_PNT_C Lycopene_cycl
Other DBs
NCBI-ProteinID: QFT25057
UniProt: A0A5P9CH83
LinkDB
Position
complement(236988..238460)
AA seq 490 aa
MKQLNVDVAVIGGGTAGLGAYRAAKAHTSSVVMIEGGPYGTTCARVGCMPSKLLIAAAES
VHQIEKAPQFGVHPQGNITINGREVMDRVKRERDRFVGFVLEGVDEIPAQDKIVGYAQFV
DNNTLNIDGHTQVTAKRIVIATGSRPAYPNVWNELGDRLVINDDVFDWDDLPKSVAVFGP
GVIGLELGQALHRLGVEIKLFGLGGQVGPLTDPEVMSYADKAFKQEFYLDADVKVEQMKR
IAASDGSKEDKVEIQFINHDGELETFIVDYVLAATGRRPNVDKLGLENTSIELDERGVPT
ADHYTLQTSADNIFIAGDASNQIPLLHEAADQGRIAGDNAGRYPDIRAGLRRSSISAVFS
DPQIAMVGESFKQLETRLGNCGCFATGAVSFENQGRSRVMLRNQGLLHVYGEQGTGRFLG
AEMIGPNAEHLAHLLAWAHQNKMTISEMLDMPFYHPVIEEGVRTALRDLNAKLHLGPEMI
KHCLDCGPGC
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaaacagcttaatgtcgatgttgcagtgattggcggtggaactgctggtttaggtgcc
tatcgcgcggccaaagcgcatacctcaagcgtggttatgattgaaggtggcccatacggc
accacttgcgctagagtcggttgtatgccatcgaaacttctgatagcagcagccgaaagt
gtgcaccaaattgagaaagcaccacagtttggtgttcatccacaaggcaatattactatc
aatggccgtgaagtgatggacagggtcaaaagggaacgcgatcgtttcgttggctttgtt
ctagaaggggtcgatgaaatacccgcccaagacaaaattgttggttatgctcagtttgtt
gataacaacacgctaaatatcgatggacacactcaagtaaccgccaagcgtattgtaatt
gcaacaggttctcgacctgcttacccaaatgtttggaatgagctgggagatcgcctagtc
attaacgatgatgtttttgactgggatgacttaccaaaatctgttgctgtatttggtcct
ggtgttattggattggagcttggccaagctttacaccgcctcggtgttgagattaagttg
tttggtctcggcggccaagttggtccactgactgacccagaagtgatgagctatgctgat
aaagcatttaaacaagagttttatttggatgccgacgtcaaagtggaacaaatgaagcgt
atcgcagcttccgatggttcgaaagaagataaagttgaaatccaatttatcaaccatgat
ggtgaacttgagacctttatcgttgattacgttcttgccgcaacaggtcgtcgaccaaat
gtggataagcttggactcgaaaatacatccattgagttagatgaacgtggtgtacctacg
gctgaccactacacactgcaaacctcggcagacaatatatttattgctggtgatgcaagt
aaccaaatccctttgttacacgaagccgccgatcaaggacgcatagcaggcgataacgcc
ggacgctacccagacatccgcgcaggacttcgccgttcatccatttcggctgtgttctcc
gaccctcaaatcgctatggtaggagaaagtttcaagcagcttgaaactcggctaggaaac
tgcggctgctttgcgaccggtgcggtatcttttgaaaaccaaggccgctcgcgagtcatg
ctgcgcaatcaaggtctattacatgtttatggtgaacaagggacgggacgcttccttgga
gcagagatgattgggccaaacgccgaacatttagcccacctactcgcttgggcacaccaa
aacaaaatgacgatatccgaaatgctggatatgcccttttaccacccagtgatagaagaa
ggtgttaggactgcgttacgtgatctcaatgcgaaactgcacctagggccagagatgatc
aagcactgccttgactgtgggcctggttgttag

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