Vibrio aquimaris: FIV01_01380
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Entry
FIV01_01380 CDS
T06969
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FIV01_01380 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaq03019
]
FIV01_01380 (orn)
03009 Ribosome biogenesis [BR:
vaq03009
]
FIV01_01380 (orn)
Messenger RNA biogenesis [BR:
vaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIV01_01380 (orn)
Ribosome biogenesis [BR:
vaq03009
]
Eukaryotic type
Pre-60S particles
RNases
FIV01_01380 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QFT25108
UniProt:
A0A5P9CFN4
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All DBs
Position
294827..295372
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AA seq
181 aa
AA seq
DB search
MSFSDQNLIWIDLEMTGLDPDTHKVIEIATIVTDSELNILAQGPVLAIHQPEEELAKMDE
WCVRTHTGSGLVARVKASKVTEQEASEQTIKFLEKWVPKGASPICGNSVGQDRRFLYQHM
PQLEEYFHYRYIDVSTIKELTRRWDSQILTGFSKSGSHLALDDIRESIAELKYYRQTVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagcgatcaaaatttaatttggattgatctagaaatgactggtttagaccct
gacacacataaagtcattgaaattgctaccatagttactgatagcgaattaaacattcta
gctcaagggccagtacttgctatccatcaacccgaagaagaacttgccaaaatggatgag
tggtgcgttagaacacacacaggtagtgggttagtggcgagagtcaaagcgagtaaagtc
actgagcaagaagccagtgaacaaactataaaattcctagagaaatgggttcctaaaggc
gcttcccctatctgtggtaacagtgttggacaagacagacgctttctttaccaacacatg
ccacaactcgaagagtattttcattatcgctatatcgacgtcagcaccataaaagaacta
acacgtcgttgggattcacaaatactgaccggcttttctaaatcgggaagtcacttggcc
ttggatgatatacgtgagtcaatcgctgaactgaaatattatcgacaaacggttttcaaa
atataa
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