KEGG   Vibrio aquimaris: FIV01_02380
Entry
FIV01_02380       CDS       T06969                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vaq  Vibrio aquimaris
Pathway
vaq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vaq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FIV01_02380 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vaq03019]
    FIV01_02380 (rnc)
   03009 Ribosome biogenesis [BR:vaq03009]
    FIV01_02380 (rnc)
   03036 Chromosome and associated proteins [BR:vaq03036]
    FIV01_02380 (rnc)
Enzymes [BR:vaq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FIV01_02380 (rnc)
Messenger RNA biogenesis [BR:vaq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FIV01_02380 (rnc)
Ribosome biogenesis [BR:vaq03009]
 Eukaryotic type
  90S particles
   RNase
    FIV01_02380 (rnc)
 Prokaryotic type
  rRNA processing factors
   FIV01_02380 (rnc)
Chromosome and associated proteins [BR:vaq03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FIV01_02380 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase
Other DBs
NCBI-ProteinID: QFT25291
UniProt: A0A5P9CGX8
LinkDB
Position
505993..506670
AA seq 225 aa
MNSPISKLEKKLGYSFNDAELIQLALTHRSAHGKHNERLEFLGDSILSFVIADDLYHRFP
DINEGDMSRMRATLVRGNTLAELGREFELGDYLKLGPGELKSGGFRRDSILADAVEAVIG
AIYLDSGIEAVRGIILSWYQQRLEAIQPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQQFTVSCEVAGIGTPVIGKGTSRRKAEQAAAQIALEQLNND
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaattctcccatatctaaattagaaaaaaagcttggttattctttcaatgacgctgag
cttattcaattagcgctgacacatcgcagcgctcatggaaaacataatgaacgtctagag
tttctgggcgattcaattttaagttttgttattgctgatgacctttatcaccgtttccct
gacattaatgaaggggatatgagtcgtatgagggcaactttggttcgaggtaatacctta
gctgagttagggcgagagtttgaacttggagattacttaaaattaggccctggtgagttg
aaaagcggtggctttcgccgtgactctattcttgcagatgcggttgaagctgtgattggt
gctatctatctagacagcgggattgaagcggtacgtggtattatcttgagttggtaccag
cagcgtcttgaggctattcagcctggagtatcgcaaaaagatcctaaaacacgcttgcag
gaatttcttcaagggcgaagaaaacctctgcctgtgtatacagtgactaatattaaaggt
gaagcacataatcagcaatttactgtttcgtgcgaagtagcaggtataggaacgcctgta
ataggtaaaggcaccagccgccgcaaggcagaacaagcggctgcgcaaattgcactagag
caactaaataatgactga

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