Vibrio aquimaris: FIV01_02635
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Entry
FIV01_02635 CDS
T06969
Symbol
bigR1
Name
(GenBank) Biofilm growth-associated repressor
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaq03000
]
FIV01_02635 (bigR1)
Transcription factors [BR:
vaq03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
FIV01_02635 (bigR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_24
HTH_11
MarR
HTH_27
HTH_34
HTH_28
DUF7346
HTH_IclR
Dimerisation
TrmB
TFIIE_alpha
DUF7344
Rrf2
HxlR
DUF2582
Pro-kuma_activ
Mga
GntR
MC2
OB_DEPS-1_6th
Fe_dep_repress
HTH_Mga
DUF6432
PaaX
HTH_1
FeoC
HTH_40
HTH_45
DUF7347
Motif
Other DBs
NCBI-ProteinID:
QFT25342
UniProt:
A0A5P9CIG8
LinkDB
All DBs
Position
566272..566580
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AA seq
102 aa
AA seq
DB search
MNLKEMEKNSAKAVVLLKAMANERRLQILCLLHNQELSVGELCSQLELSQSALSQHLAWL
RRDGLVNTRKEAQTVFYTLSSEEVKSMIHLLHSIYCAEAADV
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaagaaatggaaaaaaattctgccaaagcggtggtactactcaaagccatg
gcaaatgaaagacgcctgcaaattttatgcttattgcataatcaagaactttctgttggc
gagttatgtagtcagttagagttaagccaatcggcattatcgcagcatttagcatggttg
cgtcgtgatggtttagtgaacactcgcaaagaggctcaaaccgtgttttacacgttaagc
agtgaagaagttaagtcaatgatacaccttctgcatagtatatattgcgcagaggcggca
gacgtctga
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integrated database retrieval system
