Vibrio aquimaris: FIV01_03080
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Entry
FIV01_03080 CDS
T06969
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIV01_03080 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_03080 (recC)
Enzymes [BR:
vaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FIV01_03080 (recC)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIV01_03080 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QFT25424
UniProt:
A0A5P9CGR0
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All DBs
Position
661702..665154
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AA seq
1150 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELVRLNPLDNPFEQEQILVQSPGMSQWLKIELAKEFGVAANI
TFPLPATFIWDMFTQVLPDVPQRSAFNKEAMTWKLMQTLPRLLNNAEFSALKHYLQGDDD
QSKLYQLAEKIADIYDGYLVYRPEWIASWELEQEVLELQGEHNWQSILWRALYEHTTSLG
QSPYHRANLYQDFISKLENSTHFEQLPKRLFVFGITSLPPRYMDALKAMGKHIDVHLMFT
NPCRYYWGEVRDRKYLARLAARHRQHLVWKEDHSELEGETHQLKGDIEQNLDDELHTNAI
GNSLLASMGKLGRDNMFLLSQLDSHEIEAFVDIDRDSLLHNVQADILNLEEQHNDQLIDS
SAHKHRIEPQDDSISLHVCHSAMREVEVLHDQLLSMFDRQPSLKPRDIIVMVADINAYSP
AIQAVFGNAPGERFIPYSISDRTADQESPILHSFMQVVNLPNTRCLASELLELLEIPAIL
ARFGLSAEEFVQAKLWVEESGIRWGLDLSTGEEFDLPQTAQNTWQFGIQRMLLGYAMPDS
AGLLETQSGLLAPYNQVQGMNAELAGKLAHFIQTVSDYRSKLSVSQPIDKWREVLTLALD
DFFMVDIEGEAALKSIRDTLSGLHEQIKEAAYQQDLTPNIVSQYLKKKLSTTRVSQRFLA
GQVNFCTLMPMRSIPFHIVCLLGMNDGVYPRTVAPEGFDLMNGRSRPGDRSRRDDDRYLF
LEALLSAQQKLYISYVGRSIQDNTERVPSVLVSELMEYCQHNYCLAGDEGLDSDQSGKQL
LAWIRRLHPMVPFSVNAFTHGNVSYAKEWLPAVNRQGHSSGEFNRQLSDYLLDAVYPLDL
DLVELQRFWRLPVRYFFNRRLKVVFEPPLPVTQDEEPFALSGLESYQMRDSLLEVLLEAQ
HKGDLEQQIIIDDFIAEQRAQGKLPVGAFGDIEFETNRVQAQELVEKLAWLCCDEKEDHE
VKLSFDVLGEGRVVELSGWLTQNYRSGLVRFRSGRIRAQDYLSAWIDHLAINAMGQNQPS
HLLGYDRKEGVVHLSFPSIADMSLAQSHLGELIRLYYQGMTTPLAYFPNTALACVEAGFS
RGSWSDNQEKSFKKMAEVFNDGYFSKGEGANTYINRIWPQWNDELASQVWELAALVIQAP
RLAVQADDEK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtctaccattccaaccaagttgatgtcttaaagtccttacttgtcgaattg
gttcgcttgaaccctttagataatccctttgaacaagaacagattttggttcagagccct
ggtatgtcccagtggttgaaaatagagttagctaaagaatttggtgttgcggcaaatatt
acttttccactccccgcaacgtttatatgggatatgtttacccaagttctgcctgatgtc
cctcagcgcagcgcattcaacaaagaggcgatgacttggaagttaatgcaaacgcttcct
cggttgctaaataatgcagagttttctgccctaaaacactatctgcaaggtgatgacgat
cagagcaagctctaccagctcgcggagaaaattgcagatatttatgatggctaccttgtc
taccgacccgaatggattgccagttgggaattggaacaagaggtgcttgagttacagggg
gagcacaattggcagtctattttatggcgagctttatatgagcacaccacttctttaggt
caatcgccctatcatagagcaaatctctatcaagattttatttctaagttagaaaatagt
actcattttgaacagctacctaagcgtttgtttgtctttggtatcacgtctttgccaccg
cgctatatggacgcgctcaaagccatgggtaagcacattgatgtgcatttaatgtttact
aatccttgtcgttactactggggcgaagttcgtgatcgaaaatatcttgctcgccttgct
gctaggcaccgccaacatttggtgtggaaagaggatcattctgaacttgaaggtgaaacg
catcagcttaaaggggatattgaacaaaacttagatgacgagcttcacaccaatgcgatt
ggcaatagcttgcttgcctctatggggaaacttggcagagacaatatgtttttgctatca
cagctcgactcccatgaaattgaagcctttgtggatatcgatagagactctctgctacat
aatgtgcaagcagacattctcaatcttgaagagcagcacaatgatcaattgattgattct
agtgcccacaagcataggattgagcctcaagatgactctatcagtttgcatgtttgccac
agcgcaatgcgagaagtcgaggtgttgcatgatcaattactgtctatgtttgatcgacag
ccgagtttaaagccacgcgacattatcgttatggtggcggatatcaatgcctatagtcca
gcgattcaagctgtatttggtaatgcgccgggagagcgatttattccttattcgatatca
gatagaaccgcagatcaagaaagtcctattttgcattctttcatgcaagtagtgaactta
cccaatacccgttgtcttgcctcggagttacttgagcttttggaaatacccgccatactt
gctcggttcggcctcagtgctgaggagtttgtgcaagctaaactctgggtagaggagtcg
ggtattcgctggggactagacctcagtactggagaagaattcgatttgcctcaaacggcg
caaaatacatggcaattcggtatccagcgtatgttacttgggtatgcaatgcctgactcc
gctggattactagaaactcaaagtggtttgcttgccccttacaatcaagttcaaggcatg
aatgccgagcttgcgggaaaattggctcactttattcaaacggttagtgattatcgcagc
aagttatctgtatctcagccgattgataaatggcgtgaagtattgaccttagccttggat
gatttctttatggtagatatagagggagaagcggcacttaagtcaatacgggatacctta
tctgggttacatgagcagattaaagaggcagcctatcagcaagacttgacgccaaatatt
gtctcacagtacctcaaaaagaagctttcaacgactcgagtcagtcaacgttttcttgca
gggcaggtcaacttttgtactttgatgccaatgcgatcaattccgtttcacatcgtatgc
ctattaggaatgaatgatggtgtatatccgcggaccgtcgcgccagaaggttttgatctt
atgaatggtagatctcgacctggggaccgttcgcgccgtgatgatgataggtatcttttc
ttagaggctttgttgtctgcacaacaaaagctttacatcagttatgttggtcgctcaatt
caagataacactgaacgagtaccctcagttttggtctccgagcttatggaatattgccaa
cacaactattgcttggcgggggatgaaggcttggactccgatcaatctggcaaacaatta
ttagcatggatacggcgtttacatcccatggtgccttttagcgtcaacgcgtttacccat
ggtaatgttagctatgccaaagagtggcttccggctgttaatcgtcaaggccatagcagt
ggtgagtttaatcgccagctaagtgattatttgcttgatgctgtctatccgcttgatttg
gatttagttgaattacaacgcttttggcgattgccggtgcgatacttctttaatcggcgt
ttaaaagtggtgtttgaaccccctttgcccgtaacccaagacgaggaaccttttgccctt
agtggtctagaaagctatcaaatgagagatagcttgcttgaagttttacttgaggcgcaa
cataaaggggatcttgagcaacaaattattatcgacgattttattgcagagcaaagagct
caaggaaagttaccagtgggcgcttttggggatattgagtttgaaaccaatcgggtccaa
gcgcaggagttagtcgaaaagctagcttggctttgttgtgacgaaaaagaagatcatgaa
gtaaagttgtcgtttgacgtattaggtgagggacgagttgttgaacttagtggttggtta
acacaaaactatcgttcaggtttggtgcgctttcgcagtggtcgcataagagctcaagat
tacttatccgcttggatagatcatctagccatcaatgccatgggccaaaaccagccttcc
catctgcttggttatgatcgtaaagagggtgttgtacacttaagctttccttcaatcgct
gacatgtcattggctcaatctcatcttggtgagttgattcgactgtattatcaaggaatg
accacgcccttagcttattttcccaataccgccttagcttgtgtcgaagctggctttagt
cgaggcagttggtctgataatcaagaaaagtcgtttaagaagatggccgaagtgttcaac
gatggttatttcagcaaaggtgaaggggcgaacacttatattaataggatttggccccag
tggaatgatgagcttgcaagtcaagtatgggagttagcggctttggttatccaagctccg
agattagctgtacaggccgatgacgagaagtaa
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