Vibrio aquimaris: FIV01_03090
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Entry
FIV01_03090 CDS
T06969
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIV01_03090 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_03090 (recD)
Enzymes [BR:
vaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FIV01_03090 (recD)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIV01_03090 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
TraI_hel_assoc_N
nSTAND3
AAA_28
TrwB_AAD_bind
AAA
T2SSE
DEAD
TsaE
AAA_7
NTPase_1
CbiA
AAA_17
SRP54
Motif
Other DBs
NCBI-ProteinID:
QFT25426
UniProt:
A0A5P9CGV0
LinkDB
All DBs
Position
668863..670956
Genome browser
AA seq
697 aa
AA seq
DB search
MQSLFSYLKPLVDKGVIRQIDYQFARFAREQSGNDNIAFIAAIVSCELGHGHICLPLIDK
FGQPSDLVVKLGVFGDFADQLNYVLRKIDWLSELQNTSFVGTTDQSLPMIFDGERLYLHR
YWHYESVLAKRLKSLGSPMIIKPTDGQKLAQWLNHLFARDYRYLFSALASLQSDLAPQVA
RQQLVCDHLDVVSSEGLDWDTIDQKLLSAAKVSHLDVLDELVPLSMCVNWQKVAAAVALT
RRFAVISGGPGTGKTTTVTKLLAALNVQAQQSGQSPVIKLVAPTGKAAARLTESIGKAVA
KLPVEPSIKALIPSSASTLHRLLGAIPNSAEFRHNQQNPLHLDILVVDEASMVDLPMMYK
LVDALPRHARLILLGDKDQIASVEAGAVLGDICSFNQHGYSFEQAKLISQLTGFSSLNNH
NSQSASIADSLCMLQKSYRFDARSGIGQLAKAINSGAKTKVDLVWQKGFDDIAHFPVDAL
HYRQMIQTLVVEYSHYLNRIKPAMQGIDDEPIYDVAREALQLFSHCRLLCAVREGDFGIT
GLNHSVERALKARKLIKVQDELWYHGRPVMIVRNDYALGLYNGDIGLCLLDRSEGEARLK
VFFELADGSIKAVLPSRVPEHETAYAMTIHKSQGSEFEHTLMVLPPDPNPILTRELIYTG
VTRAKKKLSLFVDDRVMARGIKVRTQRASGLVDRLTE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtctgttttcatacctaaagcctcttgtcgataaaggcgtaattcggcagatc
gactaccaatttgctcgatttgctcgtgaacaaagtggcaatgacaatattgcctttatt
gctgcaattgtgagctgtgagttaggacatggccatatttgcctgcctttaatcgacaaa
tttggtcagccatctgatttggtagtcaaactcggtgtatttggtgatttcgcagaccaa
cttaactatgtgttgcgcaaaatagattggttgagcgagttacagaacacttcttttgtt
ggaacgactgaccagagcttacctatgattttcgatggtgaaaggctttatcttcatcgc
tattggcattacgaatctgtgttggcgaagcgattgaagagcttagggtcacccatgatc
ataaagcctactgatggtcaaaagcttgctcaatggttaaatcatctgtttgctagagac
taccggtaccttttcagcgctttagcctcattgcaatctgacttagcaccacaggtggct
agacaacaacttgtctgcgaccatcttgatgtagtcagtagcgaagggcttgattgggac
accatagaccaaaagctcttgagtgctgcaaaagtttcgcaccttgatgtgttagatgaa
ctagtacctttatctatgtgtgtgaattggcaaaaagtggcagcggcggtggctttaaca
agacgctttgccgtgatttctggtgggccaggaaccggaaaaacaaccacggtaactaag
ctgcttgctgcgttaaatgttcaggctcaacaatctggtcaatcgccagtgattaaattg
gtggcaccaacgggaaaagctgctgcacgcttaactgagtctataggaaaagctgttgct
aagcttcctgttgagccgagtatcaaagctctaataccaagcagcgcgagcacgctacat
cgtttgctaggtgctataccaaacagcgctgagtttcgtcataaccaacaaaaccctctt
catctggacatacttgttgttgacgaagcgtcaatggttgatctgcctatgatgtataag
ctggtggatgctctacccaggcacgcaagattaatactactaggtgataaggaccaaatt
gcttctgtagaggcgggcgctgtgcttggtgatatttgctcttttaatcaacatggctat
agctttgagcaagccaagctaataagtcagttaacgggtttttcatccttgaacaaccat
aatagtcagtctgctagtattgctgacagtttatgcatgttacaaaaaagctatcgtttt
gacgcccgctcaggaataggtcaattagctaaggccatcaactctggagctaagaccaag
gttgatcttgtttggcaaaaaggcttcgatgatatcgctcactttcccgttgatgccctt
cattatcggcagatgatacaaaccttagtggtagaatatagccactacttaaatcgtatt
aagccagcaatgcaggggattgatgacgagccaatttatgatgttgcaagagaagcttta
cagcttttctctcactgtcgtttgctttgtgccgttagagaaggcgactttggtattact
ggactcaatcatagtgtggaacgagcacttaaggcgcgtaaactcatcaaggtacaagat
gagctttggtatcatggcaggcctgtaatgatagtgcgtaatgattatgcactaggcctc
tacaatggtgatattggtttgtgcttgcttgatagatctgaaggagaggcgagactgaaa
gtattttttgagcttgcagatggttcaatcaaagcagtgctgcctagccgagtacctgag
catgaaactgcttatgcgatgacgattcacaaatcccaaggcagcgagtttgaacatacc
ttgatggtgctaccaccagatcctaaccctattttgacccgtgagctgatctacactggt
gtaactcgagcgaagaagaagttgagtttatttgttgatgatagagtgatggctcgcggt
ataaaagttcgcactcaaagagccagtggtttagttgataggcttaccgaataa
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