Vibrio aquimaris: FIV01_05380
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Entry
FIV01_05380 CDS
T06969
Symbol
topA2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaq03032
]
FIV01_05380 (topA2)
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_05380 (topA2)
Enzymes [BR:
vaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIV01_05380 (topA2)
DNA replication proteins [BR:
vaq03032
]
Prokaryotic type
DNA Topoisomerases
FIV01_05380 (topA2)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIV01_05380 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QFT25853
UniProt:
A0A5P9CIX6
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All DBs
Position
1129021..1131648
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AA seq
875 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGQKAAAISTKGLSAEE
KARIKKEKDRKALIKKMGIDPFNGWEPNYQILPGKEKVVAELQKLAKDADSVYLATDLDR
EGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFETPGELNMDGVNAQQARRFMDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREINAFIPEEFWDIHADTKTADKSDF
RLQVAQKGGVAFKPENEAQAQSAISVLENAAYEVCKREDRPTSSKPSAPFITSTMQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSSEAVEAARQFITDEFGEPYLPAKPNV
YGSKQGAQEAHEAIRPSDVSVKADDLSGMEADAHKLYSLIWNQFVACQMTPAKYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPPVQVGDKIDLVGLDPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSFH
ELMNYEFTSRMEEKLDQIADGEANWKKVLDNFFGDFSGELEKAELDEQDGGMRPNHIVYT
DIECPTCSREMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCEGYVVEHGEFTVKGYDGPVVDCDKCGS
DMVLKNGRFGKYMDCTSESCKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRDGA
SGLFLAASTFPKSRETRAPLVEELVRFKDRISPKFHYLTTAPEKDPDGRSMVVRFSRKSK
ENYVRSEIDGKPSGYTALFVDGKWEITDKRKKSAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactcgttattgtggagtcgccagctaaggctaaaaccatcaataagtat
ttaggtaaggactttattgtaaagtccagcgtgggtcatgtgcgagacctacctacggct
ggtcaaagtactggtcaaaaagcagcggcaatctctaccaaaggtttgagtgcggaagaa
aaagctcgaatcaagaaagaaaaagatcgtaaggcgctgattaaaaaaatgggtatcgac
ccgtttaacggctgggagcctaactatcagatcttaccgggtaaagagaaagttgttgct
gagttacaaaaattagctaaggatgctgacagtgtttatctcgcaaccgatttggaccgt
gagggggaggctatcgcttggcaccttcgcgagatcatcggtggcgatgaagagcgatac
aaacgagtagtctttaacgaaatcaccaaaaacgcgattcagcaggcttttgaaacacct
ggtgagctgaacatggatggtgtgaatgctcaacaagctcggcgtttcatggaccgtgtt
gttggttttatggtctcgccgctactttggaaaaaagtggcacgtggattgtctgctggg
cgagtacaatccgttgccgttaagctgcttgttgagcgagaaagagaaattaatgctttt
atcccagaggaattctgggatatccacgcagatactaaaacggcagataaatcagatttt
cgccttcaggtagcgcaaaaaggcggtgtagcctttaagccagaaaatgaggcgcaagct
cagtcagcaatatcagtattggaaaatgcagcttatgaggtttgtaagcgagaggacaga
cctacatcgagcaagccttctgcacctttcattacgtcgaccatgcaacaagcggcgagt
acacgccttggctatggtgtgaaaaaaaccatgatgctggctcagcgcctgtatgaagct
ggttatattacttatatgcgaactgactcgacaaatttaagctctgaggcagtcgaagct
gcgcgccagtttatcacagacgagtttggtgaaccctacttgcctgccaagccaaatgtt
tacggaagtaagcagggagctcaggaagcgcatgaggcaatacgtccttcagatgtgtca
gttaaggcagacgatctgtctggtatggaggctgatgcacacaagctttactctctaata
tggaatcagtttgtcgcttgtcaaatgacaccagcgaaatatgattctacaacagtaagt
gttaaagcagccgagtatactctaaaggcaaaaggccgaattctaaagtttgatggatgg
actcgtgttcaacgtccgcttggaaaaaatgaagaccaaattcttccaccggtacaagtt
ggtgataaaattgacttggttggcttagatcccaagcaacattttaccaagccacctgca
agatttaccgaagccgctctagttaaagagctggagaagcgaggaataggtcgcccatca
acatacgcatccatcatttctaccattcaggaccgtggctatgtgaaagtagatcagcgt
agattttatgctgaaaaaatgggtgagattgttaccgatcgtttggatgatagcttccat
gagttgatgaactatgagtttacctctcgtatggaagaaaagcttgaccaaatcgctgat
ggagaggctaactggaagaaagttctagataactttttcggtgacttttcaggggagttg
gaaaaagcagagctggatgaacaagatggcggtatgagaccgaaccacattgtttacacc
gatattgagtgtccaacatgttcgcgagaaatgggcattcgcaccgcttctacaggtgta
ttcttaggctgctctggctatgcactaccacctaaagaacgttgtaaaaccacaataaac
ttaggcgatgaagaaggcataatcaacgtacttgaagaagacgttgagacagctgcattg
cgtgccaaaaaacgctgtcctatctgtgaaacagcgatggatgcttacttaatcgacgac
aagcgtaagctacatgtttgtggtaacaacccaaattgtgaaggttatgtcgtagaacat
ggtgagtttactgtaaaaggttacgatgggcctgtagtcgactgcgataagtgtggcagc
gatatggtgctgaaaaacgggcgttttggtaagtacatggattgcacaagtgagtcatgc
aaaaacactcgtaagatccttaaaaatggtgaagtagcaccaccgaaagaagatccagtt
cattttccagagcttccatgtgaaaactcagatgcttactttgttctaagagatggtgca
tcaggactgtttcttgctgcgagtactttccctaaatctcgtgaaactcgcgctccacta
gtggaagagttggttaggtttaaagatcgcatctctcctaagtttcactacttaactacc
gctccagagaaggatcctgacgggcgttctatggtagttagattcagccgtaaatcgaag
gagaattacgtacggtcagagatagacggtaaaccatccggatacacagctttgttcgtc
gacggtaagtgggaaatcacagataagcgtaaaaagtcagcgaagtaa
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