Vibrio aquimaris: FIV01_06465
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Entry
FIV01_06465 CDS
T06969
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_06465
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
FIV01_06465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SLFN-g3_helicase
SWI2_SNF2
Zn_ribbon_3
AAA_22
AAA
DZR
AAA_30
AAA_16
DUF1829
Imm35
Zn_Ribbon_1
Zn_ribbon_RanBP
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QFT26063
UniProt:
A0A5P9CJI8
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Position
complement(1373106..1374842)
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AA seq
578 aa
AA seq
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MYTLRPYQTDSVKAVIHYFRKHSSPAVLVLPTGAGKSLVIAELARLAKGKVLVLAHVKEL
VEQNHAKYEGYQLEGAIYSAGLGRKETDKQVIFASVQSVVRNLDDFKNQFSLLVIDECHR
VADDKNTSYQKVIHHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGLVRTKEPRFFRDC
IFELPIRYLLDQNFLTPARMMDAPILSYDFSQLKPSSTGRYKEHELDMVIDQAKRATPQI
VQQIINHAHNRQGVMIFASTVRHAQEILSLLPPNESALVIGDTTVSERDSIINGFKNRNI
KFLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSSGKTECLVLDYAGNSY
DLYQPEVGEPKPSQDSEIITIPCPACGFNNNFWGKLDSNGFLIEHYGRKCQGFFEDKTSQ
EREHCDYRFRAKYCNECGADNDISARVCHQCDATLVDPDKKLKEALRLKDALVFECLAMD
LALHKNEKGKNCLKVSYVGDNQAQVHEFWSLSTPKQKQDFKDFFVRSHLADKHRPFEESS
PTKIVNHQHRFRPPQFIIARKSGRFWKIRDKIFADELT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtatacattacgaccttatcaaactgattcggtgaaagccgtgatccactattttcga
aaacactcaagtccagcagtcttggtgctaccaactggcgcaggtaaaagccttgttatt
gctgagctggctagattggctaaagggaaggtactggtcttggcacatgtcaaagagctg
gttgagcaaaatcatgccaagtacgaaggttatcagctcgaaggggctatttattctgcg
gggctaggccgaaaagaaaccgataagcaagtcatttttgcctctgtccaatcggtggtt
cgaaacttagatgatttcaaaaaccagttctctctactcgtgattgatgaatgccatagg
gtggcagacgacaagaacaccagctatcaaaaggtcattcatcacttacgagaattaaac
ccaggcattaaagtccttggtcttaccgcaaccccctaccgtctcggaatgggatggatt
tatcaataccatacgcgtggccttgttcggacaaaagaaccgagattctttcgagattgt
atttttgagttacctatccgttacctacttgaccaaaactttttgactccagctcgcatg
atggatgcccccatacttagctatgacttttcgcagttaaagccatccagcactggtaga
tacaaagagcatgagttggacatggttattgaccaagcaaaacgagccaccccgcaaatt
gttcagcaaattattaaccatgcacataataggcaaggtgttatgatttttgcctctaca
gtccgccatgctcaagagatattgtcattacttccccctaacgaatcggctttagttatc
ggtgacaccacagtctctgagcgtgattcaataatcaatggcttcaaaaatcgaaacatc
aagtttttagtgaatgtatctgtattaaccacagggtttgatgcaccgcatgtggaccta
attgctattttacgcccgaccgaatctatcagcttatatcagcaaattgtcggtaggggg
cttcgcttaagttcaggaaaaaccgaatgtttagtgctcgattatgcgggcaatagttat
gatctttaccaaccagaagtgggcgaacctaaaccttcccaagatagcgaaattatcact
attccctgccctgcatgtggttttaacaacaacttttggggcaaactcgacagtaatgga
tttctcatcgaacactatggacgaaaatgccaaggtttttttgaggataaaaccagtcaa
gaaagagaacattgtgactaccgttttagagcaaaatattgcaacgaatgtggtgcggat
aatgatatatcggcaagggtttgtcaccagtgcgacgcgacgctagtcgatcctgacaaa
aagcttaaagaggcattaaggctaaaagatgcgcttgtttttgagtgcctagctatggac
ctagccctacacaaaaatgagaaaggcaaaaattgtctaaaggtatcctatgttggtgat
aaccaagcgcaagtccatgagttttggtcattatccacaccaaaacaaaagcaggacttt
aaggacttttttgtcagatctcaccttgccgacaagcatagaccttttgaagagtcctct
ccgactaaaattgtcaaccaccagcatcgcttccgaccaccacagtttatcattgccaga
aagtcagggcgattttggaaaatacgcgataagatatttgctgatgaactgacgtga
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