Vibrio aquimaris: FIV01_06695
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Entry
FIV01_06695 CDS
T06969
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIV01_06695 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_06695 (sbcB)
Enzymes [BR:
vaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FIV01_06695 (sbcB)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIV01_06695 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIV01_06695 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIV01_06695 (sbcB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QFT26109
UniProt:
A0A5P9CIF8
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All DBs
Position
complement(1425481..1426905)
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AA seq
474 aa
AA seq
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MSNKEQPTFFFFDYETWGTSPALDRPCQFAGVRTDMDFNIVGEPLVIYCQPPSDYLPSPE
AALITGITPQTTVQHGLPEPEFIAQIHRQLSVPNTTSLGYNNIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENEEGFTSFKLEHLSVANGIEHENAHD
AMADVIATIEMAKKLKTAQPKLFDYFLNMRHKRKLNELVDIVNMTPLMHVSGMFGRECQY
TSWVVPLAWHPTNQNALIVVDLAKDPQPLFEFDTEQLNQRLYTKHSDLGPDELPVPIKLI
HLNKCPILAPAKTLTAENAEIIGINREQCLKNLELIKQNPEIREKLVALYSEERKYEASH
NVDSQLYDGFFSPADRSSMNIIKEADAEKLASLDISFYDKRIAPLLFRYRARNFPSTLSD
SEQRRWASHCQDYFANHIEDYMLNLENLVHKYEDDESKLVILKSIYKYVEKLVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaagaacaaccaacatttttcttcttcgactatgagacatgggggacaagt
ccagctctcgataggccatgccagtttgctggtgtgcgcactgatatggacttcaatatt
gttggtgagcctctggttatttactgtcagcctccttcagattatttgccttcaccggaa
gcagccctgatcacaggtattacgccacaaactaccgttcaacatggtttacctgaacca
gagtttattgctcaaattcaccgtcaactatctgttcccaatacgactagcttgggttat
aacaatatccgatttgatgatgaagttactcgctatacctgttaccgtaacttcatcgac
ccttacgcttggagctggcaaaacggcaattcacgttgggatttactggatgttatgcga
gcctgccatgcacttcggccagaaggtatcaactggccagaaaatgaagagggttttact
agctttaaactcgaacatctttctgttgccaatggtatagaacacgaaaacgcccacgat
gcgatggctgatgtgattgcaaccattgaaatggccaaaaagctcaaaaccgcccagccc
aagctgtttgattactttttaaacatgcgccataagcgcaagctcaatgagctagttgac
attgttaatatgacaccactgatgcatgtctctggtatgtttgggcgtgagtgtcaatat
acaagttgggtagtaccattagcatggcatccaaccaatcaaaatgccctgattgtagtc
gacttagctaaagatcctcagccactttttgagtttgataccgagcagttaaatcagcga
ctatacactaaacactcagacctcggcccagatgagcttcctgtgcccattaagctgata
cacctaaataaatgccctatcctagcaccagcaaaaacactgacggctgagaacgcagaa
atcataggtatcaaccgtgaacaatgcctgaaaaatcttgaacttatcaaacaaaaccct
gagattagagagaaacttgttgcgctttattcagaagaacgaaagtacgaagcaagtcac
aacgtagattcacagctatatgatggttttttctctcctgcagaccgcagctcaatgaac
attattaaagaagcagacgcagagaaattggcttcgttagacatctctttttacgataaa
cgtattgccccactcttgtttcgctatcgagcaagaaacttcccttcaactctgagtgac
agtgaacaacgtcgatgggcaagccactgccaagattattttgccaaccatattgaagac
tacatgctcaatttggaaaacttagttcacaaatatgaagatgacgaaagcaaacttgtt
attttaaaatctatctataagtacgttgagaagttagtttcgtaa
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