Vibrio aquimaris: FIV01_09480
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Entry
FIV01_09480 CDS
T06969
Symbol
gabR1
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaq03000
]
FIV01_09480 (gabR1)
Transcription factors [BR:
vaq03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FIV01_09480 (gabR1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_36
HTH_11
HTH_41
Fe_dep_repress
HTH_24
HTH_50
HTH_Crp_2
TrmB
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
QFT26658
UniProt:
A0A5P9CK17
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All DBs
Position
complement(2024130..2025602)
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AA seq
490 aa
AA seq
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MKFGKGTSLQTQIKNMISTSILDGHIRCGESLPSCRELAKTLGVSRNTVVLAYEKLIEEG
YVIAKERKGFFVHFTYDENLVASHSSLPPREACVNWDNKLKLVPSRQHHLHKPDAWRQCE
YPFIYGQPDPEFFPVREWRECTQRAAQTLQAKEWLQDRVDEDDPLLIDQLRTRILARRGV
RCNNHEILLTVGTQHSLYLLSQLLGGLGTCLGLETPGYPDVRHIFDLNQTNLCELDVDKD
GLVVNQKIDDCDYVFVTPSHQSPTTVTMPLQRRLKLLQKAVDHDFVLIEDDYESELNFYS
TPTPALKSLDNEGRVIYVGSLSKTLAPGLRVGYLVGPEHLIREARALRRLMMRHTPANNQ
RALALFLAGGYHDTLVHRLKLRYAERYELLKTALQEFMPSVEMAPSMGGSAIWLKGPQGL
DCVRLQKEALKHGVYIETGIQHFHQLSKGKYEASRYFRLGFSLIKTDRIQDGVRLLSHAV
EKVLSPTKLV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggcaagggtaccagtttgcaaacccagattaagaacatgatcagtacgagt
atcctcgatggtcacattcgttgcggcgaatcgctcccctcatgccgagaactggcaaaa
acgctaggagtttcccgcaatactgtggttctagcttatgaaaagctgattgaggaaggg
tatgtgattgccaaagagagaaagggattctttgttcattttacctatgacgagaatcta
gtggcaagccactcttctttgcccccaagagaagcatgtgtcaattgggataataaacta
aaacttgtaccgtctcggcaacatcatttgcataaaccagatgcttggaggcagtgtgaa
tacccatttatttatgggcaacctgatcctgaattttttcctgttagggagtggcgggag
tgtacccaacgagcagcgcagactctacaagcaaaagagtggttgcaagaccgagttgat
gaagatgacccgctattaatcgatcagcttaggactcgcattcttgcgcgccgaggggtt
cgctgtaacaatcatgagatcttacttacagtgggcacccagcattcactttacctgttg
agccaattgcttggagggcttggcacttgcctcggactagaaactcctggttatcccgat
gttcgccacatttttgatcttaaccagacaaacctttgtgagttggacgtagacaaagac
ggattggttgtgaaccaaaagatcgatgattgtgactatgtatttgtaacacctagccat
caatcacccaccacagtcaccatgccgttacagcgtcgtcttaagcttttacagaaagcg
gttgaccatgactttgtgctcattgaagatgattatgagagtgagcttaacttctattca
acgccaaccccggcactaaagagtttagataacgaaggcagagtgatttatgtcggtagt
ttatcgaaaacgctagcaccgggtttgagagttggttacttggttggaccagagcatcta
atacgggaagcccgtgcgttgaggcgattaatgatgcgccacacgccggccaataaccaa
cgcgcattggcgcttttcctagctggtggctaccacgataccttggtacatagactgaaa
cttagatatgctgagcgttatgaattgctgaaaacagcattgcaagagttcatgcctagt
gttgaaatggcaccatctatgggtggcagtgcgatatggcttaaagggcctcaaggttta
gattgtgtccgtttacaaaaagaagcattaaaacatggtgtgtatatcgagactggaatc
caacactttcatcagctctctaaaggcaaatatgaggcaagtcgatatttccggttgggg
ttttcgctaataaagacggaccgcatccaagatggggtccgcctattatctcatgcagtt
gagaaagtactttcgcctacaaagctggtgtga
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