Vibrio aquimaris: FIV01_09835
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Entry
FIV01_09835 CDS
T06969
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03030
DNA replication
vaq03430
Mismatch repair
vaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV01_09835 (holB)
03430 Mismatch repair
FIV01_09835 (holB)
03440 Homologous recombination
FIV01_09835 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaq03032
]
FIV01_09835 (holB)
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_09835 (holB)
Enzymes [BR:
vaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV01_09835 (holB)
DNA replication proteins [BR:
vaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV01_09835 (holB)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV01_09835 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
QFT26727
UniProt:
A0A5P9CLW2
LinkDB
All DBs
Position
complement(2102774..2103736)
Genome browser
AA seq
320 aa
AA seq
DB search
MISTYPWLSSIWKEWQSSLEQDTFPNAVLLSSHLGLATEALTSSFAQALMCSNYASEACG
ICHSCQLMQVNNHPDYHLIKPEKSAKSISVDQIRGCNRLAQESSQLSGKRIFIIEPAEAM
TESAANALLKTLEEPSGTCMFLLISYQPHRLLPTVSSRCQRWQVTKPSAHEVADWLSEKV
SVNIPPHIAHINGNAPTTIQLFLDKGQEALYQQIELGLLDVLKNRGDMIALAKQLASSHE
ESLNWMWYILTDAQKLHFGLDAPYFSPIAKELIHYLSYEKLFQQTENLSNLTEQLREYSG
LNSELLILDWLIKLNEEVCS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatatccacgtatccatggttaagtagcatttggaaggaatggcagtctagcctagag
caggacacctttcccaatgccgttttgctgagttctcatctaggtttggctactgaagcg
ttgacctcgtcatttgctcaagctttgatgtgtagcaactatgctagtgaagcttgcggt
atttgtcatagttgccagttaatgcaggtaaacaaccaccccgattaccatcttattaag
ccggagaaaagtgctaaatcaatcagtgtggaccaaattcgaggttgtaatcgattagcg
caggagtcatcgcagctatctggaaagcgtatcttcatcatcgagccagccgaggcaatg
acagaatctgccgcaaatgcgcttttaaagactcttgaagagccctcgggtacctgtatg
ttcttacttatctcttatcagccacaccggttgcttccgacggtgagtagccgatgtcaa
aggtggcaagttactaaaccttcggcgcacgaagtcgctgattggttaagtgagaaagtg
tcagtgaatatccctcctcatatcgcacatatcaacggtaatgcgcccaccactattcag
ttatttttggataaaggacaagaagcgctttatcagcaaatagaattaggtctattggat
gtgcttaagaatcgtggtgatatgatcgctttggccaagcaactcgctagctctcacgaa
gagtctttgaattggatgtggtacatactcactgacgcacagaagcttcattttggactc
gatgcaccatacttttcccccattgcaaaagagcttatacactacttaagctatgagaag
ctctttcaacaaacagaaaatttgagcaatttaacagagcaactcagagaatactcaggg
cttaatagtgaattgctaattctggattggttaatcaagcttaacgaggaagtatgttca
tag
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