Vibrio aquimaris: FIV01_10090
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Entry
FIV01_10090 CDS
T06969
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaq03032
]
FIV01_10090 (ihfB)
03036 Chromosome and associated proteins [BR:
vaq03036
]
FIV01_10090 (ihfB)
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_10090 (ihfB)
DNA replication proteins [BR:
vaq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIV01_10090 (ihfB)
Chromosome and associated proteins [BR:
vaq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIV01_10090 (ihfB)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIV01_10090 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Glycos_trans_3N
HU-CCDC81_euk_1
HU-DNA_bdg
HAAS
DUF4777
Motif
Other DBs
NCBI-ProteinID:
QFT26778
UniProt:
A0A5P9CKE1
LinkDB
All DBs
Position
complement(2157140..2157421)
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMASTLETGDRIEIRGFGSFSLHYREPRV
GRNPKTGAKVELDGKHVPHFKPGKELRERVNIG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaactgatagaaaggctctgcgccgagcaaacccatctttcagctaaa
gagatagaagatgctgtgaaagacatattggaacatatggcttcgacactagaaactggt
gatagaattgaaattcgtggatttggtagtttttctcttcattatcgtgagcctcgggta
ggccgtaaccctaaaactggagcaaaagtggagctagatgggaaacatgttcctcacttt
aaaccaggtaaagagctgcgtgaacgagttaatattggctaa
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