Vibrio aquimaris: FIV01_11990
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Entry
FIV01_11990 CDS
T06969
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vaq03021
]
FIV01_11990
03009 Ribosome biogenesis [BR:
vaq03009
]
FIV01_11990
Transcription machinery [BR:
vaq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FIV01_11990
Ribosome biogenesis [BR:
vaq03009
]
Prokaryotic type
rRNA transcription factors
FIV01_11990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QFT27152
UniProt:
A0A5P9CNG8
LinkDB
All DBs
Position
complement(2570427..2571914)
Genome browser
AA seq
495 aa
AA seq
DB search
MSKEILAVAEAVSNEKGVPRERIFEALEIALATSTKKKHEIEIDVRVEIDRKTGEFDTFR
RWLVVEEVENPTKEISLEAAQYEDDSIELGAFVEDEIESVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGELVTGVVKKVNRDTIILDLGNNAEAVILRDDQLPRENHRPGDRVR
GLLYRVAPDARGFQLFITRSKPEMLAELFRVEVPEIAEEIIELKGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQLVINAMAPADVASIIVDE
DAHAMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVEDLHKKHTEESQAAIENFM
KYLDIEEDFAQLLVEEGFSSLEEVAYVPVNELLEVDGLDEDLVEELRNRAKDALTTLALA
QEESFDGLEPAEDLLALEGLERELAFKLAAKGVVTLEDLADQGIDDLEGVEGLTEERAGE
LIMAARNICWFGEEE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattttagcggtagcagaagcggtatcgaatgaaaaaggggtacctcgt
gaacgtatttttgaagcgctagagatcgctttagcgacatcgactaagaaaaagcacgaa
attgagattgatgtacgtgtagagattgaccgtaaaacaggcgaatttgatacattccgc
cgttggcttgtggttgaagaagtagaaaatccaactaaggaaatttctctagaagcggct
cagtatgaagacgactcaattgaacttggtgcttttgtagaagatgagatcgagtcagtt
acttttgatcgaatcactactcaaaccgcaaagcaagttattgtacagaaagtacgtgaa
gcagagcgtgcacaaattgtagaacagttcatcgataacgaaggtgaactggtaactggt
gtagttaaaaaggtaaaccgagacaccattattcttgatttgggcaataatgctgaagcg
gtaatcctgcgtgatgaccaacttccgcgcgagaaccatcgtccaggcgaccgtgttcgt
gggttattgtaccgtgttgcgcctgatgcccgtggcttccagctatttatcactcgctca
aaaccagaaatgcttgcagagcttttccgcgttgaagtgccggaaattgctgaagagatt
atcgagcttaaaggtgcagctcgcgatcctggctctcgtgcaaagattgcggttaagacc
aatgataaacgcatcgacccagtgggagcctgtgtaggtatgcgtggtgctcgtgttcaa
gccgtatcaggcgagcttggtggagagcgtattgatatcgtgctttgggatgacaaccca
gcacaacttgttatcaatgcgatggcacctgcagatgttgcttcgatcattgttgatgaa
gacgctcatgctatggacattgccgttgaagctgataacttggcacaagcgattggtcgt
aacggtcagaatgtacgtttggcatctcagcttactggctgggagctgaatgtgatgaca
gtagaagacttgcataagaaacacacagaagagtctcaggctgcgattgagaacttcatg
aagtacctcgatattgaagaagactttgctcaattgctggttgaagagggtttctcttca
ctggaagaagtagcttatgttccagtcaatgagctgttggaagttgatggcttggatgaa
gacttggttgaagaactgcgtaatcgagctaaagatgctttgactaccttggctcttgcc
caagaggaatcttttgatggtttagagcccgctgaagacttgctagcgttagaaggttta
gagcgtgaacttgctttcaaactcgcagcaaaaggagtggtgacacttgaagatcttgct
gaccaaggtattgacgatctcgaaggtgtagaaggtcttaccgaagagcgtgctggtgag
cttatcatggcagcacgtaatatttgttggttcggtgaagaagaataa
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