KEGG   Vibrio aquimaris: FIV01_12065
Entry
FIV01_12065       CDS       T06969                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
vaq  Vibrio aquimaris
Pathway
vaq03030  DNA replication
vaq03430  Mismatch repair
vaq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vaq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FIV01_12065 (holD)
   03430 Mismatch repair
    FIV01_12065 (holD)
   03440 Homologous recombination
    FIV01_12065 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vaq03032]
    FIV01_12065 (holD)
   03400 DNA repair and recombination proteins [BR:vaq03400]
    FIV01_12065 (holD)
Enzymes [BR:vaq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FIV01_12065 (holD)
DNA replication proteins [BR:vaq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FIV01_12065 (holD)
DNA repair and recombination proteins [BR:vaq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FIV01_12065 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: QFT27165
UniProt: A0A5P9CLQ0
LinkDB
Position
complement(2586597..2586995)
AA seq 132 aa
MLSNQHIYLHEMGIQAYEVQDINLLQGYKAKPISLAETCKLLFVADTYPIGDTAELLEKV
LKSMDLSTAEALHIYPQYLPFVSSHTQVWTWFAGCQIDPSIQGKVLSSPSLSCVKGNSQY
RRELWQQICENR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctgagcaatcaacatatttatttgcatgaaatgggcattcaggcttatgaagtgcaa
gatattaatctgctacaagggtataaagctaagccgattagtttagcagaaacatgtaag
ctcttgtttgtagctgatacttatcctatcggagatactgcagagttacttgaaaaagtc
ttgaaaagcatggatcttagcacagctgaagctctgcatatctacccacaatatctccct
tttgtatcaagccacactcaggtttggacctggtttgcaggatgtcagatagacccaagc
attcaaggtaaggtcttaagctcaccaagcttatcttgcgttaaaggtaactctcaatat
agacgagagttatggcaacaaatttgtgagaatcgataa

DBGET integrated database retrieval system