Vibrio aquimaris: FIV01_12455
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Entry
FIV01_12455 CDS
T06969
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaq03016
]
FIV01_12455 (truD)
Enzymes [BR:
vaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FIV01_12455 (truD)
Transfer RNA biogenesis [BR:
vaq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIV01_12455 (truD)
Prokaryotic type
FIV01_12455 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
NAD_binding_11
Motif
Other DBs
NCBI-ProteinID:
QFT27243
UniProt:
A0A5P9CMS1
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All DBs
Position
complement(2677928..2678992)
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AA seq
354 aa
AA seq
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MYSGNGMTDILSSLAYLYGRPNSTGKLKVEPEHFQVSEDLGFDFSGEGEHLMVRIRKTGE
NTSFVANELAKACGVKPKDVSWAGLKDRHAVTEQWLSVHLPKGGDPDLRSFLTQYPSIEV
VETRRHNKKLRPGDLVGNHFSITLTEVSDVEDVIQRLQAISLHGVPNYFGSQRFGNQGNN
LEEARRWGRENVRTRNQNKRSLYLSAARSWIFNTIVSKRIENNSFDRAVEGDCLLTDEGI
VLAEAQKLVALNESIREGSVSITAALAGDNELPTVSDGLLIEQPQLDVEPDLMALIRGNR
MRHERRSIVLKPQDLTWSIDRDSVKLDFSLDAGCFATALIRELIQEIKVERNYQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgtacagtggtaatggtatgaccgatattttgtcttctttggcttatttatatggccgc
cccaattcaaccggaaaattaaaagttgagccagaacattttcaggtaagtgaagatcta
ggctttgatttctccggtgaaggcgaacaccttatggttcgaattcgaaaaacaggggaa
aatacaagctttgtcgcgaatgaattagccaaagcttgtggagttaagccaaaagatgtc
agctgggcaggattaaaagatcgccatgccgttacggagcaatggcttagtgtgcatttg
cccaagggcggagatccagacttgcgctctttcctgacccagtatcctagtatagaagtg
gtagaaactaggcgtcacaataagaagcttaggcctggtgatttagtcggaaaccatttt
agcatcacactgacggaagtgagtgatgttgaagatgttatccagcgtttgcaagcgatt
agtttgcatggtgtgcctaattattttggtagtcagcgttttggtaatcagggtaataac
cttgaagaggctagacgttggggaagggaaaatgttcgcactcgtaatcagaataaacgc
agcctttatctttccgctgctcgctcatggatttttaatacaattgtctcaaaacgcatt
gaaaacaactcgttcgatcgagcggttgagggggactgccttttgacagatgaaggcatc
gttttagctgaagcacaaaaactggtcgccttaaatgaaagcatccgcgaagggagtgtg
tctattactgcggctctggccggtgacaatgagttacctacggtttccgatggcctctta
atcgagcagcctcagctggatgttgaacctgatttgatggcgttaattcgaggcaaccga
atgcggcatgagagacgaagcatagtccttaaaccgcaagacttaacatggagcatcgat
agggattcagttaagttagacttttctttagatgcaggttgctttgcgacggcgctgatt
cgagagctgatccaagaaataaaagtggagcgcaattaccaatga
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