Vibrio aquimaris: FIV01_12690
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Entry
FIV01_12690 CDS
T06969
Name
(GenBank) recombinase A
KO
K03553
recombination protein RecA
Organism
vaq
Vibrio aquimaris
Pathway
vaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIV01_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_12690
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIV01_12690
RecFOR pathway proteins
FIV01_12690
TLS (translesion DNA synthesis) factors
Other SOS response factors
FIV01_12690
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Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
ATPase
Rad51
MT3502_N
AAA_24
ATPase_2
AAA_25
AAA_16
CbiA
AAA_22
PAXNEB
CobU
AAA_14
AAA_35
MobB
CLP1_P
AAA_28
AAA
nSTAND3
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QFT27274
UniProt:
A0A5P9CM10
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All DBs
Position
complement(2718141..2719187)
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AA seq
348 aa
AA seq
DB search
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI
VEIYGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDT
GEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN
LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQG
KANAAKFLRENVNVSQTIDATLRDMLLSPAEIQADDAELEQMPEKEEL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacgataacaaacagaaagcgctcgcggcagcgcttggtcagattgaaaagcaattc
ggtaaaggttctatcatgcgtcttggcgataaccgtgccatggatgtagaaaccatctct
actggttcactttctcttgatattgcgttaggtgctggtggccttcctatggggcgcatt
gtcgaaatctatggtcctgaatcatcgggtaaaacgacactcactcttgaacttattgcc
gctgctcaacgtgaaggcaaaacctgtgcttttattgatgcagaacatgcacttgaccct
gtttatgcgaaaaaattgggcgtcgatatagatgccttattagtgtctcagccagatact
ggtgagcaagcacttgaaatttgtgatgcattagctcgctctggtgcgattgacgttatg
gtggttgactctgttgctgcgttaacgccaaaagcagaaattgaaggtgagatgggtgat
agccacatgggtcttcaggctcgtatgctgtcgcaagctatgcgtaaactaacgggtaac
cttaagcagtcaaactgtatgtgtatcttcattaaccaaattcgtatgaaaataggtgtg
atgtttggcaaccctgaaaccacaacaggtggtaatgcacttaaattctatgcttcagtt
cgccttgatattcgtcgtacaggttcaatcaaagaaggcgatgaagttgtcggtaacgaa
actcgtatcaaagtggttaagaacaagatcgcagcgccatttaaacaagcggaaactcag
attatgtatggtcaagggtttaaccgtgaaggtgagctgattgatttgggtgtgaaacac
aaactgattgagaaagctggtgcttggtatagctacaatggtgataaaattggccaaggt
aaagcgaatgcagccaagttcttgcgtgaaaatgtgaatgtttcgcaaactattgatgct
acgctgcgcgatatgctgctttctcccgctgaaattcaagctgatgacgctgagttagag
caaatgccagagaaagaagagttgtaa
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