Vibrio aquimaris: FIV01_12765
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Entry
FIV01_12765 CDS
T06969
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vaq
Vibrio aquimaris
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vaq03021
]
FIV01_12765 (rapA)
Transcription machinery [BR:
vaq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FIV01_12765 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
STB2_C
AAA_34
WWE
Motif
Other DBs
NCBI-ProteinID:
QFT27289
UniProt:
A0A5P9CLW7
LinkDB
All DBs
Position
complement(2737655..2740564)
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVALDNRTVTLMFAASEENRVYSRNDAPVTRVTFNTGDL
VDSQEGWSLKVEQVVEEQGLFTYIGTREDTDEHDVTLREIMLSNQIRFNKPQDKLFAGQI
DRMDNFVLRYRALVNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLAGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DADNPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSPEKPSREYQIIE
GLAENTPGVLLLTATPEQLGRESHFARLRLLDSDRFYDYQAFVEEEEQYAPVADSVSALF
SGESLSNDAKNQITELLTEQDVEPLFRIIENDSQEAEKAKARQELIDNLMDRHGTGRILF
RNTRAAIKGFPVRNLHMLPMPIPSQYATSMRVSGLIGGKISQEARALKNLYPEEIFQEFE
GEEASWWQFDSRVNWLIEKIKQKRSEKILVIASRSTTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLEQTSQAILARWFNEGLNAFADTCPTGRAVYDEFSGRLIEMLATGD
TTELDDVIAQSAAMNQTLKAQLEQGRDRLLEMHSNGGEKAQEIVESIAATDGDTNLVTFA
LSLFDTIGLNQDDKGENAIVVTPSEHMMVPSYPGLPYEGATITFDRNTALSREDMNFISW
EHPMIQGGIDLLMSEGVGTAAVSLLKNKALPVGTMLLELVYKVDAQAPKRSGISRFLPAT
PIRLMLDGKGSDLSEQVEFESFNRQLSPVGRHMATKLVSSVQPQVHQMITAGEELVMDKV
AAVREQAQRDMKASLNTELERLQALKAVNPNIRDEELSAIEQQISQLDSYIAKAQYQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttgggccagcgctggataagcgatacggaaagcgatttaggtttagga
actgtagttgcattggacaatcgtactgtgacactaatgtttgcagcgtccgaagaaaac
cgagtttactctcgtaacgatgcgcctgttactcgtgtcactttcaacacgggtgatctt
gtagatagtcaggaaggatggtcacttaaagttgagcaggttgtggaagagcagggcctt
tttacctacataggaacccgtgaagataccgatgaacatgatgtcactttacgtgagatt
atgcttagcaaccagattcgatttaataaaccgcaagataaattgttcgccggccaaatc
gatcgtatggacaatttcgtactgcgctatcgagcgctagtgaatcagtaccagcaacat
aagagtccgatgcgtggtctgtgtggtatgcgagcaggtttgattccgcatcaactttac
attgctcatgaagttggccgccgacacgctccgcgcgtactcctcgctgatgaagtcggt
ctaggtaaaaccatcgaagcgggcatgatcatccaccagcaggtgctggccggtcgtgct
gagcgtattttgattgtggttccagaaaccttgcagcatcaatggttagtggaaatgatg
cgccgctttaatctgcacttttctatttttgatgaagaacgctgtatagaagcctttgcc
gatgccgataacccgtttgatacccagcaatatgtgttgtgttctttggattttctgcgt
aaaagccgcaaacgttttgagcaagctttggaaggggagtgggatttattggtggtggat
gaagcgcaccatcttgagtggagtccggaaaaaccaagtcgggaatatcaaatcattgaa
ggtttggctgaaaataccccaggtgtgcttctgttgaccgcaacaccagagcaacttggc
cgagaaagccattttgctcgtctacgtttgctcgattctgatcgcttttatgactaccaa
gcctttgttgaagaagaagagcaatatgccccagtcgcagattcagtcagcgccttgttt
tccggtgagtctttatcgaacgatgccaaaaaccaaatcactgagctactgacagagcaa
gatgttgaacccttatttcgcattatagaaaatgattctcaggaagcggaaaaagccaaa
gctcgtcaggaattgattgataatctgatggatcgtcacggaacggggcgtattttattt
cgtaatactcgcgcggcgattaaaggctttccggttcgtaaccttcatatgttacctatg
ccgatcccttctcagtacgcaacgtcgatgcgtgtttcaggtttaatcggtggcaagatt
agtcaagaagcccgcgcgttaaaaaacctctaccctgaagaaatttttcaagaatttgag
ggtgaggaagccagctggtggcagtttgattcacgcgtgaattggctgatcgaaaaaatt
aagcaaaagcgcagtgaaaagatcttggtgattgcgtcgcgctctacaaccgcattgcaa
ttagagcaagctctgcgcgagcgtgaaggcattcgtgccactgtgtttcatgagggcatg
tctattcttgagcgagataaagcggcggcttattttgcgcaggaagaaggtggcgctcag
gtgctgatttgtagtgaaattggctctgaagggcgcaacttccagtttgcaaatcaactg
gtaatgttcgacttgccattcaaccctgatcttctagagcagcggattggtcgtcttgac
cgtattggtcaaaaccgggacattgatattcatgttccctatctagagcaaacctcacag
gctattttagcccgctggtttaacgaaggtttgaatgcatttgctgatacctgcccaacc
ggtcgagcggtatatgatgagttctctggccgtttaattgaaatgttggccacaggcgat
accacagagctcgacgacgtgattgcccaatcggcagccatgaatcaaactctgaaagcg
cagcttgagcaaggtcgagatcgcttgcttgaaatgcactcaaatggtggtgagaaggcg
caggaaatcgttgaaagtattgcggcaaccgatggcgatactaatctggtcacctttgct
ttaagtctgttcgatactatcggtctgaatcaggacgataaaggcgagaacgccatagtg
gtcacaccatcggaacatatgatggtgccaagttatccaggactgccttacgaaggggcg
accatcacttttgaccgcaatacggctttatctcgcgaagatatgaacttcatcagttgg
gaacacccaatgattcaaggaggcatcgatcttctgatgagtgaaggtgtaggcacagct
gcggtatctttgctcaagaacaaggcattgccggttggcaccatgctgcttgagctggtt
tacaaagtggatgcacaagcgccaaagcgcagtggtattagccgatttttgcctgccacc
ccaattcgccttatgttagacggtaaaggcagcgatttgtcggagcaggttgagtttgaa
agctttaaccgacagctcagccctgtagggcgccatatggcgaccaaattggtctcatca
gttcagccacaagtgcaccaaatgatcacggcgggcgaagaacttgtcatggataaagtc
gctgctgtgcgcgagcaggcgcagcgtgatatgaaagccagtctaaatacagagctagag
cgcttacaagcactcaaagcggtcaacccaaatatccgtgatgaggaattaagtgcaatt
gagcagcagataagccaattagatagctacattgctaaagctcaatatcagctggactca
ttgcgcttaattgtcgtctctcataactaa
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