Vibrio aquimaris: FIV01_12980 Help Entry FIV01_12980       CDS       T06969                                  Symbol rpoN Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism vaq  Vibrio aquimaris Pathway vaq02020   Two-component system vaq02040   Flagellar assembly vaq05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vaq00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FIV01_12980 (rpoN)  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     FIV01_12980 (rpoN)   09142 Cell motility    02040 Flagellar assembly     FIV01_12980 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vaq03021]     FIV01_12980 (rpoN) Transcription machinery [BR:vaq03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FIV01_12980 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 TetR_C_5-like Motif Other DBs NCBI-ProteinID:  QFT27332 UniProt:  A0A5P9CNX0 LinkDB All DBs Position 2788354..2789814 Genome browser AA seq 486 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLELEENSEDNTNLE DKSAREEKESSSEATEPEVKDSSELIETSEISKELEIDTTWEDVYSANTGSTGLALDDDT PVYQGETTQSLHDYLTWQLDLTPFSDTDRTIAMAIIDAIDDYGYLTISTQDILESFNHEE IELDEIEAVRKRIQQFDPLGVASNNLQDCLLLQLAAFPEDTPWLKEAQLVLTEHIDQLGN RDYKLIIREAKLKESDLKEALNLIQQLDPRPGSRIAAEHAEYVIPDVSVFKEHGKWRVTI NPDSIPRLKVNQHYAALGKGNSSDSQYIRSNLQEAKWLIKSLESRNETLLKVAKCIVEHQ RDFFEYGEEAMKPMVLNDVALDVDMHESTISRVTTQKFMHTPRGIFELKYFFSSHVSTDN GGECSSTAIRALIKKLVAAENSAKPLSDSKIAALLADQGIQVARRTIAKYRESLGIAPSS QRKRLL NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt atgaaaccctcattacaactcaagctaggacaacagttagcaatgaccccacagttgcaa caagccattcgcttgctgcaactctctactctggatctccagcaagagattcaagaagcc ttggactccaacccactgttagaattagaagagaactcagaagacaatacaaacctcgaa gacaagtcagcgagggaagaaaaagaaagtagctctgaagccacagaaccagaggtgaaa gacagttcagaacttatcgaaacttcggaaataagtaaagaactcgaaattgatacaaca tgggaagatgtgtacagcgcgaatacaggcagtactggcttagctttagatgatgacact cccgtataccaaggtgaaaccactcaatcgctgcatgattaccttacttggcagttggat ttaaccccatttagtgacacggacagaaccatagctatggcgataattgacgccatagac gactatggctacctcaccatatcaacccaagatattctagagagctttaaccatgaagaa attgagcttgatgaaattgaagccgtccgcaagcgtattcaacagtttgaccctctaggc gttgcatcaaataatttgcaagattgcctactacttcagcttgccgctttccccgaggat acaccttggctaaaagaagctcaattagtgctgactgagcatatagatcagctaggcaat cgcgattataagctgattataagagaggctaagctaaaagagtccgatcttaaagaagcc ttaaatttaattcaacaattggacccaagacctggcagccgtattgcagcggaacacgct gaatatgtcattccagatgtatctgtatttaaagagcatggtaaatggcgggtaaccata aaccctgactctatacccagactgaaagtcaaccaacactatgcagctttaggaaagggg aacagctccgatagccaatatattcgctccaacctacaagaagcaaaatggctgataaaa agtctagaaagtagaaatgaaactttgttaaaagttgcaaaatgtattgttgaacatcag cgtgatttctttgaatatggggaagaagcaatgaaacccatggtactcaatgatgtcgct ctggatgttgatatgcacgaatcgacaatttcaagggtaacgacccagaagttcatgcac actccgagaggtatttttgaattaaaatatttcttttctagccatgtcagtaccgacaat ggtggagagtgttcatccactgcaatccgagctttgatcaaaaagttggttgctgccgaa aatagtgccaaaccactcagtgacagtaagattgcagctctacttgctgaccaagggatt caggtcgctagacgaactatagcgaaataccgagaatctctaggcatcgccccttcgagt cagcgcaaacgcctactttaa

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