Vibrio aquimaris: FIV01_14055
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Entry
FIV01_14055 CDS
T06969
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIV01_14055 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaq03019
]
FIV01_14055 (recQ2)
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_14055 (recQ2)
Enzymes [BR:
vaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV01_14055 (recQ2)
Messenger RNA biogenesis [BR:
vaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIV01_14055 (recQ2)
DNA repair and recombination proteins [BR:
vaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIV01_14055 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QFT27519
UniProt:
A0A5P9CMJ6
LinkDB
All DBs
Position
complement(2998264..3000099)
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AA seq
611 aa
AA seq
DB search
MTETLFAQQAEPSITPEVVLEEVFGYKTFRDGQKEVIDSVVSGQDCIVIMPTGGGKSLCY
QIPALVCKGLTIVISPLISLMKDQVDQLKANGVSAECINSTMTREELSSVYSRMQMGQLK
LVYLSPERVLMRDFVERLETLSLSMIAVDEAHCISQWGHDFRPEYASLGQLKQQFPHVPI
MALTATADEATRNDITQRLQLREPHVYLGSFDRPNIRYTLLEKHKPISQIIRFVTGQKNQ
CGIIYCGSRKKVEMVTEKLCNNHIRAASYHAGLDTDERAYVQEAFQRDDIQIVVATVAFG
MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMGWLRRMLDEKDE
GPQKQVESHKLNAMSAFAEAQICRRQVLLNYFGQYSDKPCGNCDICLDPPKHFDATDQAR
KAISCVYRVNQSFGIGYVVEVLRGMQTSRIREHGHDKLSTYGLGRENSHDYWVSIFRQLI
HKGMLTQNITRNSTLQLTEEARPLLRGNMILELAVPRLDTAARTAKSDKLTSKNYDKKLF
AKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFL
DLIQEHVSYHG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacattgtttgctcaacaagccgaaccctcaatcacacctgaagttgtccta
gaagaagtgtttggctataaaacatttcgcgatggtcaaaaagaagtgatcgattctgta
gtgagcggtcaggattgtatcgtcattatgccaactggtggaggaaagtcactctgctac
cagatcccagctttagtctgtaaagggttaactatagtgatttctcctttgatttcacta
atgaaagaccaagttgatcagttaaaagctaatggtgtttcggctgagtgtataaactca
acaatgacgcgcgaggaacttagtagcgtatacagtcgtatgcaaatggggcaattaaaa
cttgtttatctttctccagagcgggtgctcatgcgagactttgttgagcggcttgaaact
ctttcgttgtcaatgattgctgttgatgaagctcattgtatatctcagtgggggcatgat
tttagaccagaatatgcctctttgggtcaactaaaacagcaatttcctcatgtgcctatt
atggcgctgaccgccaccgccgatgaagcgactcgtaatgatattacccaaagattgcag
cttcgagagccacatgtttatttaggcagctttgataggcccaacattcgctataccttg
ctagagaaacataaacccatttctcagatcataagattcgttacgggacaaaaaaaccag
tgcggcattatttattgtggtagccgcaagaaagtcgaaatggtgacagaaaaattgtgc
aacaaccatatccgtgctgcgagttatcatgctgggctagataccgatgaacgagcttat
gttcaagaagcctttcagcgtgatgatatacagatagtggttgccaccgtcgcttttggt
atggggattaataagcctaacgttcgttttgttgttcatttcgatattccacgcaacata
gagtcctactatcaggagacgggtcgagctggtcgagatggtctgccagctgaagccatg
atgctgtatgacccagcggacatgggttggttacgacgcatgttggatgaaaaagatgaa
gggccgcaaaagcaggtagaaagtcataagttaaatgccatgagtgctttcgctgaagcg
caaatttgtcggcgccaagtcctactcaattattttggtcaatacagtgataagccttgc
ggcaattgtgatatttgccttgacccacccaaacattttgatgcaactgaccaagcacgt
aaggcaatatcttgcgtttatcgagtcaaccagagctttgggattggttatgtggttgaa
gtgctgcgcggcatgcaaaccagccgcattagagagcatggtcatgacaagctctcaact
tatggtcttggccgtgaaaacagccatgattactgggtcagtatttttcgtcagttgata
cataaagggatgctgacacaaaatattacccgtaattcaacgcttcagttgactgaagaa
gctcgcccactcttacggggtaatatgatcttagagttggcggttcctagactggatact
gccgcgagaacggctaaatcagataagctaaccagtaagaattacgataagaagttattt
gccaagctgcgcaaattgcgtaaatcgattgctgatgaagatgggctaccaccatatgtc
gtctttagtgatgcaacattaattgacatggcagaaatattacctacttcttatggtgaa
atgttggctgttagtggggtaggccagcgtaagttggagaaatacgccgatccattttta
gatttgattcaggagcatgtttcttaccatggttga
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