KEGG   Vibrio aquimaris: FIV01_14805
Entry
FIV01_14805       CDS       T06969                                 
Symbol
polC2
Name
(GenBank) DNA polymerase III PolC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vaq  Vibrio aquimaris
Pathway
vaq03030  DNA replication
vaq03430  Mismatch repair
vaq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vaq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FIV01_14805 (polC2)
   03430 Mismatch repair
    FIV01_14805 (polC2)
   03440 Homologous recombination
    FIV01_14805 (polC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vaq03032]
    FIV01_14805 (polC2)
   03400 DNA repair and recombination proteins [BR:vaq03400]
    FIV01_14805 (polC2)
Enzymes [BR:vaq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FIV01_14805 (polC2)
DNA replication proteins [BR:vaq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FIV01_14805 (polC2)
DNA repair and recombination proteins [BR:vaq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FIV01_14805 (polC2)
SSDB
Motif
Pfam: RNase_T CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: QFT27654
UniProt: A0A5P9CN40
LinkDB
Position
pTHAF100_a:complement(12751..13470)
AA seq 239 aa
MINNLINASHINWQKTFDIKHKQSKDSALKKYYAASVPNLMTPIEETTFLAMDFETTGLD
SNHDDIITIGTVPFTLNRIFLNQARHWTVRPRQQLAEESVVIHGITHSDILDAPDLIEIY
EQVLEQMAGKIMVVHYQRIEREFFDRALTDRINEGIEFPVIDTMHLETLYQQQANGSFLK
RLIGKKPESVRLGASRTRYGLPNYTPHHALTDAVATAELLQAQIAHHYKRTTKLGEVWI
NT seq 720 nt   +upstreamnt  +downstreamnt
atgatcaacaatctcatcaatgcttctcatatcaactggcaaaaaacatttgatattaaa
cataagcaaagcaaagattcagcactgaaaaagtattatgctgccagtgtacctaactta
atgactcctattgaggagacgacctttttggcgatggattttgaaaccactgggttagat
tctaaccatgatgacatcatcaccatagggacagtcccttttactcttaatcgaattttt
ctaaatcaagctcgtcattggacagtaagacctcgccaacaacttgcggaagaatctgtg
gttattcatggtattacccatagtgacatactcgatgctcccgatttaattgagatatac
gagcaagtgttagagcaaatggcgggcaaaatcatggtcgtgcactatcagagaatcgag
cgggagttttttgaccgagcgctgaccgatcgcatcaacgaaggtattgagtttccggtt
attgataccatgcacctagaaactctctatcagcagcaagccaatggcagctttttaaag
cgattgataggaaaaaagcctgaatccgtgcgccttggagcaagtagaacccgctatggc
ctgcccaattacacgccacaccatgcactgactgatgccgtcgcaaccgcagaactgctg
caagctcaaatagcgcatcattacaaacgcaccacaaaacttggggaagtctggatataa

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